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Detailed information on CNT30667347


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 4e-42

BLAST vs NONCODE:
NONGMAT001327, E-value = 1e-25

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30317753Triticum dicoccoidesCorylus avellana46.0430.0383.25209forward
CNT30442146Triticum dicoccoidesAegilops tauschii97.8101.1493.24444forward
CNT30252948Triticum dicoccoidesAvena sativa64.9856.9594.24295forward
CNT30148852Triticum dicoccoidesBrachypodium distachyon55.7356.9893.68253forward

Expression of CNT30667347

Peptides detected in this lncRNA

>peptide 1 (59 aa)
MSPEMRFTPPLLASLRIAGLVMPWMLSRSTFRWRLAPPLPSPLPPLPRPDIAGDEMEAV*

>peptide 2 (51 aa)
FTRQTTETSIASALDSRQGGYDYRATQETAGSASELMALSRQSRRGCGPGA*

Sequence

>CNT30667347
TTTCACTAGACAAACTACAGAAACAAGCATAGCCAGCGCACTAGATTCACGACAGGGGGGATACGACTACAGAGCAACGCAGGAAACAGCAGGGTCAGCC
AGCGAGCTGATGGCGCTCAGCCGCCAAAGCCGTAGAGGGTGCGGCCCTGGCGCTTGAGGGCGTACACGACGTCCATGGCGGTGACGGTGACGGCGTCGCG
GATGACGTTCTCGAGGAAGATCTTGAGGACGCCGCGGGTCTCCTCGTAGATGAGCCCCGAGATGCGCTTCACGCCGCCCCTCCTCGCCAGCCTCCGGATC
GCCGGCTTGGTGATGCCCTGGATGTTGTCGCGGAGCACCTTCCGGTGGCGCTTGGCGCCGCCCTTGCCGAGCCCCTTGCCGCCCTTGCCACGCCCAGACA
TCGCCGGAGATGAGATGGAAGCAGTCTAACAGGGGATAATGGGAGTCGCTGTTG