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Detailed information on CNT3066731


BLAST search results

BLAST vs Swiss-Prot:
sp|P32439|MFS18_MAIZE, E-value = 3e-19

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690797Leersia perrieriOryza sativa28.8822.7792.47186forward
CNT30552282Leersia perrieriOryza glaberrima23.4526.6893.38151forward
CNT30369445Leersia perrieriOryza glumipatula2526.8393.17161forward

Expression of CNT3066731

Peptides detected in this lncRNA

>peptide 1 (87 aa)
MPPPKIGMLPMPKPGVEPLLPGRLNPGMLLPPGIPPNAGTALPNRSNGGNVCGCTTVSLLSVAAAAVLMFLASAPATASTSTAATAII

>peptide 2 (50 aa)
MQSKQTLARRQCKLTAHKITARASPETHSMRPRVRYIEHMNYPSISHHHH*

>peptide 3 (38 aa)
MASSPAWRRRRGIRACRRRRLACCRCRSRGWSRCCRGG*

>peptide 4 (37 aa)
LYLIITIQHNNYHIFSIIHALERTLVLLHDHQELKTQ*

Sequence

>CNT3066731
ACTTATATTTAATCATCACCATACAACACAATAATTATCACATATTTAGCATTATTCATGCCCTCGAGAGAACACTGGTACTACTACATGATCACCAGGA
ACTTAAAACACAATAATAGATAAGAACCTAATTAAACAAACAAACACAGCCAACCAACAAACATAATATCCTCCAATGCAAAGTAAACAAACGCTAGCTA
GAAGACAGTGCAAGCTAACTGCACATAAAATAACCGCGCGCGCGTCACCAGAAACTCACTCCATGCGTCCACGCGTGCGCTACATAGAGCACATGAATTA
CCCATCCATCAGTCATCATCATCACTAGCTCGATCATGGCTTCTTCTCCTGCTTGGAGGCGGCGGCGGGGGATCCGGGCATGCCGCCGCCGAAGATTGGC
ATGCTGCCGATGCCGAAGCCGGGGGTGGAGCCGCTGCTGCCGGGGAGGCTGAACCCCGGGATGCTGCTGCCGCCGGGCATCCCTCCGAACGCCGGCACCG
CGCTCCCGAACCGGTCGAACGGCGGGAACGTCTGCGGCTGCACCACCGTCTCCTTGCTCTCCGTCGCCGCCGCCGCCGTCTTGATGTTCCTCGCCTCCGC
TCCGGCCACCGCCAGCACCAGCACCGCCGCCACCGCCATCATCA