Detailed information on CNT3066724


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30552286Leersia perrieriOryza glaberrima44.5219.0387.69130reverse complement
CNT30595465Leersia perrieriOryza meridionalis44.5221.8188.46130reverse complement
CNT30369297Leersia perrieriOryza glumipatula44.5220.7787.69130reverse complement
CNT30106043Leersia perrieriOryza longistaminata44.5236.6286.15130reverse complement
CNT3099917Leersia perrieriOryza rufipogon44.5219.0387.69130reverse complement
CNT30574627Leersia perrieriOryza barthii44.5222.2687.69130reverse complement
CNT30115788Leersia perrieriOryza nivara44.5220.2586.92130reverse complement

Expression of CNT3066724

Peptides detected in this lncRNA

>peptide 1 (29 aa)
RLLCLFGQRELNCIDVLFSIQYIISSNMK*

>peptide 2 (38 aa)
ASSMSVWTERTKLHRCTLQYSVYNQFKYEVNSEIKTSN*

Sequence

>CNT3066724
GGCGTCTTCTATGTCTGTTTGGACAGAGAGAACTAAACTGCATCGATGTACTCTTCAGTATTCAGTATATAATCAGTTCAAATATGAAGTAAATTCTGAA
ATTAAAACCTCTAACTGAGCAAACTCTGGTTTTGCACAGAGTCACATACTGTAGTAAAAGCAGGTTTGGGCTTCTTGGCATGCTTGCTCTTGTTCTTGCT
TTGGTTAACGATAGGTGAAATAGGTTTTGGCCTATGAGTGGTGACAGTGGTACCCTTGTACCATGCTGCCTTCACCACCCTTTCTGCAGGAT