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Detailed information on CNT30666951


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302127Triticum dicoccoidesTriticum aestivum22.068.4888.7162forward
CNT30150279Triticum dicoccoidesBrachypodium distachyon26.3318.1885.1474forward

Expression of CNT30666951

Peptides detected in this lncRNA

>peptide 1 (35 aa)
PRAVYRNWSERPRRSAAQEQDQGKEKVRVRERNSL*

>peptide 2 (64 aa)
SCCVQELVGEAKEISSTRARPREGKSARSRKKQFVKILQRFYWRQYARKILLVVEELGKARISC*

>peptide 3 (92 aa)
LVLCTGTGRRGQGDQQHKSKTKGRKKCAFEKETVCEDFAKILLATVCQEDSTGRGGARESSYIMLSVHFCCVLANCPCVAAVYMQKVPNIYI*

Sequence

>CNT30666951
CCTCGTGCTGTGTACAGGAACTGGTCGGAGAGGCCAAGGAGATCAGCAGCACAAGAGCAAGACCAAGGGAAGGAAAAAGTGCGCGTTCGAGAAAGAAACA
GTTTGTGAAGATTTTGCAAAGATTCTACTGGCGACAGTATGCCAGGAAGATTCTACTGGTCGTGGAGGAGCTAGGGAAAGCTCGTATATCATGCTGAGTG
TGCATTTTTGCTGTGTACTAGCTAATTGCCCATGCGTTGCAGCGGTGTATATGCAGAAAGTGCCTAACATATATATTTAGG