Detailed information on CNT3066684


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30246648Leersia perrieriAvena sativa97.4829.4681.55309forward
CNT30149227Leersia perrieriBrachypodium distachyon62.4676.1584.85198forward
CNT30603551Leersia perrieriOryza punctata10036.1994.01317forward

Expression of CNT3066684

Peptides detected in this lncRNA

>peptide 1 (32 aa)
MPFRCSPWMSLLGFICPLFKMSRRTDMLSART*

>peptide 2 (40 aa)
MVVDRRHCIRLERPSATPTPESPHSTMRWTALAVTSKSCLY

Sequence

>CNT3066684
TATGCATCTCTCCACATCGGCTTGCCAGTTGATGATGCTTGCTGCTAGGCATTGGTAGGTTGGGCTCTTGATGCCGTTCCGGTGTTCCCCTTGGATGAGC
TTACTGGGGTTTATCTGTCCACTGTTCAAGATGTCGCGAAGGACCGACATGCTGAGTGCACGGACATGAGCGCTGGGGTGCGAAAGGCAGCGGATGGTGG
TGGATAGACGGCACTGCATCAGATTGGAGAGGCCATCAGCAACTCCTACACCTGAATCTCCCCATTCGACAATGAGATGGACTGCTCTAGCGGTTACTTC
CAAAAGCTGCTTGTATT