Detailed information on CNT30666800


BLAST search results

BLAST vs Swiss-Prot:
sp|Q95H50|RK16_WHEAT, E-value = 2e-34

BLAST vs NONCODE:
NONSLYT000089, E-value = 1e-29

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30637615Triticum dicoccoidesCapsicum annuum23.217.5494.5555reverse complement
CNT30717952Triticum dicoccoidesMalus domestica golden23.2115.3289.0955forward
CNT30119130Triticum dicoccoidesCitrus clementina20.685.193.8849forward
CNT30557814Triticum dicoccoidesPanicum hallii90.320.795.33214forward

Expression of CNT30666800

Peptides detected in this lncRNA

>peptide 1 (61 aa)
SCYCSSSCIYLSRRDPSGFKCLKSISTKTNTIASAGFSFHSSSMLFAKSGSFGVIHSNYIK*

Sequence

>CNT30666800
TCGTGTTATTGCTCTTCGTCCTGCATCTATCTGTCTCGCCGTGATCCAAGCGGGTTCAAGTGCTTGAAGAGCATATCTACCAAAACAAATACGATTGCCT
CGGCAGGATTTTCCTTTCATTCTTCCTCTATGTTGTTTGCGAAATCTGGTTCTTTTGGGGTTATACATAGCAATTATATTAAATGATTTATCAATTTTCA
TTAAATCTTATAGAAAGAGGTATAATTTCTTCTTTTG