« Back to Triticum dicoccoides search


Detailed information on CNT30666747


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691121Triticum dicoccoidesOryza sativa23.2236.1686.7398forward
CNT30689632Triticum dicoccoidesTriticum urartu99.7686.8100421forward
CNT30595766Triticum dicoccoidesOryza meridionalis23.2234.5183.6798forward
CNT30100064Triticum dicoccoidesOryza rufipogon23.2235.6486.7398forward
CNT30575377Triticum dicoccoidesOryza barthii23.2244.9586.7398forward

Expression of CNT30666747

Peptides detected in this lncRNA

>peptide 1 (73 aa)
FLLRMLDKQFAALTLYRLQNKSWKFSEMDIGSLQSSNLFSAVHAAREKLASRPGGGRSRRDRHEPFSGRRNHP*

Sequence

>CNT30666747
GTTTTCTTCTGAGGATGCTTGATAAGCAATTTGCAGCACTAACATTGTACAGGTTACAGAACAAAAGCTGGAAATTCAGTGAAATGGACATCGGATCTCT
ACAGAGTTCAAATCTTTTCTCAGCTGTCCACGCTGCCAGGGAGAAGCTTGCGAGTCGTCCTGGAGGGGGTCGAAGTCGACGAGACCGTCACGAACCGTTC
AGCGGCCGCCGGAATCACCCGTGACGGCTTGACGACTTCGACAACGGAGAGGTTGTAGGAATCCGTCCCAAGGCGGCTCTGCGCCCACCCTTTCCGGCCC
GAGAAGCCGCCGGTACGCGAGGAACGCGGCTCCGGCGGCCACGACGTAGTCCGTGCCTTCCAGGGACCCGATGGTCTGCACAGTCTCCGAGGCGATCGGC
TTCGCGGCGCCGAAGGCCGGCT