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Detailed information on CNT30666718


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 3e-102

BLAST vs NONCODE:
NONMEST001181, E-value = 1e-93

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30302644Triticum dicoccoidesTriticum aestivum74.4726.494.15496forward
CNT30127456Triticum dicoccoidesCorymbia citriodora69.6758.4491.38464forward
CNT30107350Triticum dicoccoidesOryza longistaminata70.2754.2390.38468forward
CNT30150050Triticum dicoccoidesBrachypodium distachyon70.5735.1392.77470forward

Expression of CNT30666718

Peptides detected in this lncRNA

>peptide 1 (46 aa)
MRRCWSGGMPSLSWILALTLSMVSELSTSRVMVLPVRVFTKICICRE

>peptide 2 (53 aa)
MPSLSWILALTLSIVSELSTSRVMVLPVRVFTKICMPPRRRRTRWRVDSFWML*

>peptide 3 (55 aa)
ILMCQQRFQPTDSSLNQRSRTDTGIRQFSNQHSRTHTNEKTVLLNDRAPPTGRPG*

Sequence

>CNT30666718
ATACTGATGTGCCAGCAACGGTTTCAACCAACAGATAGTTCGCTAAACCAACGCAGTAGGACTGACACGGGGATTCGACAGTTTTCAAACCAACACAGTA
GGACTCACACGAACGAGAAAACAGTTCTACTGAACGACAGGGCACCGCCCACCGGACGACCAGGATAAACCAGCAGCTCAAACGACAGGGCAATTACTGA
CCACCGCGAAGACGGAGCACCAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCTGCGAGGGTGCGACCATCCTCCAGCTGCTTGCCAGCAAAGATCA
GGCGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACATTGTCGATTGTGTCGGAGCTCTCAACCTCCAGGGTGATGGTCTTGCC
GGTGAGGGTCTTCACGAAGATCTGCATGCCACCACGCAGACGCAGGACAAGGTGGAGGGTGGACTCCTTCTGGATGTTGTAGTCAGCAAGGGTACGGCCA
TCCTCCAGCTGCTTGCCAGCGAAGATGAGACGCTGCTGGTCCGGGGGAATGCCCTCCTTGTCCTGGATCTTGGCCTTGACGTTGTCTATGGTGTCGGAGC
TCTCAACCTCTAGGGTGATGGTCTTGCCAGTGAGGGTCTTCACAAAGATCTGCATCTGCAGAGAAG