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Detailed information on CNT30666465


BLAST search results

BLAST vs Swiss-Prot:
sp|P69326|UBIQ_WHEAT, E-value = 1e-38

BLAST vs NONCODE:
NONSTUT000620, E-value = 7e-27

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30190923Triticum dicoccoidesSecale cereale49.3347.5496.85222forward
CNT30395877Triticum dicoccoidesTriticum turgidum10096.57100450forward

Expression of CNT30666465

Peptides detected in this lncRNA

>peptide 1 (32 aa)
RISSILHDQFNARICRQIATQVWQEQHNYTRY*

>peptide 2 (67 aa)
MSRHLLATTQAEHQVEGGLLLDVVVSQGAAILELLAGKDEALLVRGDSLLVLDLGLHIVDRVRRLDLK

>peptide 3 (29 aa)
MRRCWSGGIPSLSWILAFTLSIVSDDSTSR

>peptide 4 (29 aa)
MAGTTQLHTILRVHLLIIQPPKPLTSLSM*

Sequence

>CNT30666465
CAAGAATTTCCTCAATACTTCATGACCAGTTCAATGCAAGAATCTGCCGACAAATAGCAACACAAGTATGGCAGGAACAACACAATTACACACGATATTA
AGGGTTCACTTATTAATCATCCAACCTCCAAAGCCACTCACATCATTAAGTATGTAAGCACAACCAAACATAACAGAGATAGAAAGACGACCAAAACAGA
AACTGAAAACACCATTGAGTACACCGACGAGACAGAAGCAGCGCCATGAGCAGGCACTTACTGGCCACCACGCAGGCGGAGCACCAGGTGGAGGGTGGAC
TCCTTCTGGATGTTGTAGTCAGCCAGGGTGCGGCCATCCTCGAGCTGCTTGCCGGCAAAGATGAGGCGCTGCTGGTCCGGGGGGATTCCCTCCTTGTCCT
GGATCTTGGCCTTCACATTGTCGATCGTGTCAGACGACTCGACCTCAAGG