Detailed information on CNT30666432


BLAST search results

BLAST vs Swiss-Prot:
sp|P93401|NU2M_OENBE, E-value = 2e-40

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30373827Triticum dicoccoidesArabidopsis thaliana75.4126.6693.77273forward
CNT30402960Triticum dicoccoidesBeta vulgaris37.5711.6594.12136forward
CNT30708145Triticum dicoccoidesGlycine max73.292.9892.45265forward
CNT30314569Triticum dicoccoidesCamelina sativa43.379.6996.18157forward
CNT30689350Triticum dicoccoidesTriticum urartu10023.1397.51362forward
CNT30103440Triticum dicoccoidesOryza rufipogon90.6120.2596.65328forward

Expression of CNT30666432

Peptides detected in this lncRNA

>peptide 1 (45 aa)
MSKMKVALMIKISGETAKKRLNMWFRVSITSSTFISSVFQIAELIQ

>peptide 2 (61 aa)
MVPAVLNNRRIWQKYVKLSLLKKLFQNKWAIVRRGAPAASRSKVIRTLSNPSQPTLLTNGG*

Sequence

>CNT30666432
ATGGTACCAGCCGTACTTAATAATAGAAGGATTTGGCAGAAATATGTAAAATTGTCCCTCTTAAAAAAATTATTCCAGAATAAATGGGCCATAGTTAGGA
GAGGTGCGCCAGCGGCGAGCAGAAGCAAGGTTATTAGAACACTAAGTAATCCAAGCCAACCCACATTACTAACTAACGGTGGATAATCATCTTTCTTAGA
GGTACTAAATACAACTCCATGAATGAGCAAAATGAAGGTTGCGTTAATGATAAAGATCTCTGGGGAAACCGCTAAAAAAAGATTGAACATGTGGTTCCGA
GTTTCGATAACTTCTTCTACTTTCATTTCCTCCGTCTTCCAAATCGCAGAGTTAATTCAAAA