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Detailed information on CNT30666211


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 0.0

BLAST vs NONCODE:
NONMTRT001605, E-value = 3e-37

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30394768Triticum dicoccoidesTriticum turgidum10090.1198.331075forward
CNT30138598Triticum dicoccoidesLolium perenne71.3563.2885.53767forward

Expression of CNT30666211

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MAQRQWITSSSRFLAKVSGSADRPAVSHP*

>peptide 2 (32 aa)
MTDSTLLARNKVGGKCPCVVVDRVGEVVSEVL*

>peptide 3 (38 aa)
MPRGRRQGRAGQNCHPGRAGRRSHRAAHRQCGSPRRRP*

>peptide 4 (43 aa)
MACTKKPNMENMARRPFLISLTLSSANASGSSARPSGSKLPPG*

>peptide 5 (62 aa)
MVTRASPKRNDDGRFFTALPAKAGEESDMVVAAILIDGGSMCSPRMRSGCGDGLRGSGQWAS*

Sequence

>CNT30666211
TCGGATGATCGAATCCTCGTAATTTACATCAACCTATTTGGGAGAACATAAGCTTTTGCAAAGAATCCTTGTCTCTTTTCCAGACAATCGAATCCTCGTA
ATTTACATCATGGTAGTACAACTTGGACTGCACAATGACTGACTCCACCTTACTTGCCCGGAACAAAGTTGGTGGCAAATGCCCATGCGTTGTTGTTGAC
AGGGTCGGAGAGGTGGTCAGCGAGGTTCTCTAATGGACCCTTGCCGGTGACGATGGCTTGCACAAAGAAACCGAACATGGAAAACATGGCGAGGCGACCG
TTCTTGATCTCCTTAACCTTGAGCTCGGCGAATGCCTCGGGGTCGTCGGCAAGGCCGAGCGGGTCAAAACTGCCACCCGGGTAGAGCGGGTCGACGATCT
CACCGAGCGGCCCACCGGCAATGCGGTAGCCCTCGACGGCGCCCATGAGCACGACCTGACAAGCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCT
TGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCAAACAGCCTCGCCGAACTTCACACCGTTGCGGGCGAGCAGC
TCGGGGAAGACGCAACCGAGCGCGCCAAGCATGGCCCAGCGGCAGTGGATCACCTCGAGTTCCCGGTTCTTGGCGAAGGTCTCGGGGTCAGCCGACAGAC
CAGCGGTGTCCCACCCGTAGTCGCCGGGGAACTCACCGGTCAGATAGCTCGGGGGCTCACCAGAAAGCGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTA
CCACGGGCTGCCGGAGGCAACCTGCTTGGCCTTTGCCGCTGTCTTGCGCATGGTGACGCGAGCCTCCCCGAAAAGAAACGACGATGGCAGGTTCTTCACT
GCCTTGCCGGCAAAGGCTGGGGAAGAGAGTGACATGGTGGTTGCAGCCATTCTGATCGATGGAGGTTCTATGTGTTCTCCAAGAATGAGGAGTGGGTGTG
GAGATGGCTTAAGGGGATCGGGGCAATGGGCTTCTTAAGGCAGTGGACGGGCAGAGGAAATTGAACTGGTGTAAG