« Back to Triticum dicoccoides search


Detailed information on CNT30666088


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 4e-69

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30630495Triticum dicoccoidesVigna unguiculata18.225.7580.82146forward
CNT30710271Triticum dicoccoidesGlycine max22.5736.3583.98181forward
CNT30298930Triticum dicoccoidesTriticum aestivum61.8559.69100496forward
CNT30249341Triticum dicoccoidesAvena sativa41.5255.0494.89333forward
CNT30446699Triticum dicoccoidesSaccharum spontaneum24.4421.8590.82196forward
CNT302119Triticum dicoccoidesZea mays39.1554.2392.36314forward
CNT30651308Triticum dicoccoidesRosa chinensis16.8323.4483.7135forward
CNT30579578Triticum dicoccoidesEchinochloa crusgalli43.6442.5388.29350forward
CNT3049718Triticum dicoccoidesCucumis sativus18.3328.1680.95147forward

Expression of CNT30666088

Peptides detected in this lncRNA

>peptide 1 (72 aa)
MARVAGRGLAEGDQAAVIRWRVAAEACVAMAMAVALQARWFLAREEMGGGAEATRARGRWGCVWWVMSRRDG*

>peptide 2 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

Sequence

>CNT30666088
TCATCATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAGGACGTCCATCAT
CATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCCGGTGAACTTGAC
CTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCGTCCTTGGGGTGG
AGGCACTGCTCCTTGCGGGCGAGCTTGAGGAGGTTGGGCCCCTCGCGCATGATGGCGGCGCCGCCAGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGG
TCCAGGTGATGACGTAGAACTCCTCGACCTGGGCCTTGCGGAGGAGGCCGCCCGTGCTGCCGCCGAAGATCGGGGACGGGGTGGACGGGTCCAGCTGCGG
CGGCACGAAGCCCGCGGGGGCGGGCTCCGCCGGCGGCGCCGCTGGGGCGGGGCGGGGCCGGGCCGCGGGCGGAGGATGGCATGGCGAGGGTGGCGGGGCG
GGGCTTGGCGGAGGGCGACCAGGCCGCGGTGATCAGGTGGCGCGTCGCCGCCGAGGCTTGCGTGGCCATGGCCATGGCGGTGGCGCTCCAAGCTCGGTGG
TTCTTGGCGAGAGAGGAGATGGGGGGAGGAGCCGAGGCCACACGCGCGCGCGGGAGATGGGGTTGTGTCTGGTGGGTGATGAGTAGGAGAGATGGCTGAG
CT