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Detailed information on CNT30665949


BLAST search results

BLAST vs Swiss-Prot:
sp|P09755|CB22_SOYBN, E-value = 5e-44

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696173Triticum dicoccoidesOryza sativa50.1252.3392.02426forward
CNT30187536Triticum dicoccoidesSecale cereale67.1865.6397.9571forward
CNT30301046Triticum dicoccoidesTriticum aestivum88.8291.2998.01755forward
CNT30393967Triticum dicoccoidesTriticum turgidum70.5910097.83600forward
CNT30554920Triticum dicoccoidesOryza glaberrima50.2457.9492.04427forward
CNT30251938Triticum dicoccoidesAvena sativa65.5370.4293.9557forward
CNT30456255Triticum dicoccoidesSaccharum spontaneum58.4760.7689.94497forward
CNT30129613Triticum dicoccoidesCorymbia citriodora49.1857.191.15418forward
CNT30369202Triticum dicoccoidesOryza glumipatula41.8839.9695.22356forward
CNT30108138Triticum dicoccoidesOryza longistaminata50.5953.0994.65430forward
CNT30103236Triticum dicoccoidesOryza rufipogon57.5349.5492.64489forward
CNT30574663Triticum dicoccoidesOryza barthii56.9458.8193.18484forward
CNT30115779Triticum dicoccoidesOryza nivara40.2465.1495.32342forward
CNT30603587Triticum dicoccoidesOryza punctata40.1267.1395.01341forward

Expression of CNT30665949

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIANFE*

>peptide 2 (35 aa)
MQHLSVRTTQSHNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 3 (74 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSASSSGKTQPSAPSMAQRQWITSSSRFLAKVSGSAERPAVSQP*

Sequence

>CNT30665949
TTAAGCAGAAGAACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAACTCCTCATCTCGA
CTCGCGCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCACAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGC
CATGAAGTTGTCGGCCTAGAGGTTGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAG
GTGGTCGGCGAGGTTCTCCAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCC
TTCACCTTGAGCTCCGCGAACGCCTCGGGGTCCTCGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATCACCT
CCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGG
GTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTG
ATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATTGCTAACT
TCGAGTGAGCTGAGGCTGACAGTAGGAGGCGCTGGTGGTCGTTGGTGACT