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Detailed information on CNT30665854


BLAST search results

BLAST vs Swiss-Prot:
sp|P36213|PSAD_HORVU, E-value = 5e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678303Triticum dicoccoidesSetaria viridis37.0754.7893.85195forward
CNT30522020Triticum dicoccoidesSetaria italica53.9959.9295.07284forward
CNT30517240Triticum dicoccoidesJuglans regia17.4930.4682.6192forward
CNT30299532Triticum dicoccoidesTriticum aestivum60.4662.35100318forward
CNT30228866Triticum dicoccoidesAnanas comosus43.3526.0985.09228forward
CNT30362113Triticum dicoccoidesSorghum bicolor26.6221.1597.86140forward
CNT30596794Triticum dicoccoidesOryza meridionalis55.744.1993.17293forward
CNT30499040Triticum dicoccoidesDigitaria exilis35.9327.7993.12189forward

Expression of CNT30665854

Peptides detected in this lncRNA

>peptide 1 (37 aa)
MSKEFLPVNLTSMGLTFLPMLRKFCPTPCLPALTFSG*

>peptide 2 (29 aa)
YSSIIIKLPCTYNLMHHYHRSNPSFKLDN*

Sequence

>CNT30665854
CATACAGCAGTATCATCATCAAATTACCATGTACATATAACCTGATGCATCATTATCACCGATCGAATCCATCATTCAAACTCGACAATTAAAATTACAG
GACGTCCATCATCATCGCCACCCGCCAATAACTACCGGTCGATGAACTAGCACGTACGCATATACGACGTACGAGATTAGATGTCGAAGGAGTTCTTGCC
GGTGAACTTGACCTCGATGGGGCTGACGTTCTTGCCGATGCTGCGGAAGTTCTGCCCCACGCCCTGCCTGCCGGCGTTGACCTTCTCCGGGTAGACGCCG
TCCTTGGGGTGGAGGTACTGCACCTCGCCGTTGGGGAAGACGCGGTAGAACTGGTAGGCGATCTTGTACTTGGAGCGGAGGCGGTTGCCGAGGGCGAGGC
ACTGCTCCTTGCGGGCGAGCTTGAGGAGGTTGGGCCCCTCGCGCATGATGGCGGCGCCGCCAGTGGGCATCTCGAAGACCTGCTCCTTGGGGGAGGTGGC
GCGTCGCCGCCGAGGCTTGCGTGGCC