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Detailed information on CNT30665836


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 1e-71

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30258024Triticum dicoccoidesAvena sativa48.6471.9392.68287forward

Expression of CNT30665836

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MKLTHCTWRMLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

>peptide 2 (79 aa)
MCMCIYIAIGSIHIRACFLESCREHGHTHILILGTNKKDKWKRKTQSNVRVDKTAMALYMWPVVSELFRPCRTPRSPVA*

Sequence

>CNT30665836
TTCTCATTAATTACCCAAATACATAGTCGACAGATTGTACTTATAATATTATGTGCATGTGCATATACATAGCCATCGGTAGCATTCACATACGAGCATG
CTTTCTCGAGTCATGTCGGGAACATGGACATACACATATTCTTATCTTAGGAACAAACAAGAAAGATAAATGGAAAAGGAAAACCCAAAGCAATGTCAGA
GTTGACAAAACCGCAATGGCACTTTATATGTGGCCCGTGGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAA
GCTGACGCACTGCACCTGGCGCATGTTGTCGAATCCGATGATGCGGACATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATCACCTGC
GTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTACCGGCCATCATAGTACCCAGGGGATGCGTTGTGCTCACGGAAGATGAACCCAA
CCTTGCTGAACTCGAGGCAAGGCACCCACTTGGAGCGGATCAGGTATATAGCTTGCTAGGAGGAGGCACTCTGGCTTGAGGACTGCTGCG