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Detailed information on CNT30665783


BLAST search results

BLAST vs Swiss-Prot:
sp|Q03033|EF1A_WHEAT, E-value = 4e-145

BLAST vs NONCODE:
NONBNAT001751, E-value = 8e-164

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30691950Triticum dicoccoidesOryza sativa92.3253.487.87841forward
CNT30677701Triticum dicoccoidesSetaria viridis73.6697.9686.74671forward
CNT30521187Triticum dicoccoidesSetaria italica91.8864.2487.69837forward
CNT30639730Triticum dicoccoidesNymphaea colorata59.3958.8782.44541forward
CNT30535563Triticum dicoccoidesEucalyptus grandis76.9585.9184.02701forward
CNT30316757Triticum dicoccoidesCorylus avellana76.9558.5185.16701forward
CNT30546799Triticum dicoccoidesIpomoea triloba90.1266.8683.31821forward
CNT30518094Triticum dicoccoidesJuglans regia76.9574.8984.59701forward
CNT30371709Triticum dicoccoidesArabidopsis thaliana67.5195.584.07615forward
CNT30618435Triticum dicoccoidesSesamum indicum38.270.8885.34348forward
CNT30274113Triticum dicoccoidesChenopodium quinoa37.7655.1386.92344forward
CNT3021028Triticum dicoccoidesCitrullus lanatus52.9138.8184.85482forward
CNT30727591Triticum dicoccoidesCorchorus capsularis89.930.3385.23819forward
CNT30380230Triticum dicoccoidesManihot esculenta87.4932.8583.19797forward
CNT30525464Triticum dicoccoidesPhaseolus vulgaris61.5899.2985.38561forward
CNT30629544Triticum dicoccoidesVigna unguiculata42.9251.7285.93391forward
CNT30194937Triticum dicoccoidesPisum sativum90.1282.1881.24821forward
CNT30505987Triticum dicoccoidesNicotiana attenuata26.7874.1689.75244forward
CNT30160120Triticum dicoccoidesPistacia vera89.7965.8183.99818forward
CNT30287202Triticum dicoccoidesTriticum aestivum46.9859.5392.99428forward
CNT30224132Triticum dicoccoidesHordeum vulgare47.262.6891.63430forward
CNT30387246Triticum dicoccoidesTriticum turgidum92.3273.0786.8841forward
CNT30564257Triticum dicoccoidesActinidia chinensis54.1243.0287.42493forward
CNT3084119Triticum dicoccoidesVigna radiata53.0227.1385.71483forward
CNT30541587Triticum dicoccoidesBrassica napus90.7870.3282.83827forward
CNT30233993Triticum dicoccoidesBrassica oleracea90.787783.43827forward
CNT30173274Triticum dicoccoidesTrifolium pratense92.2162.4583.57840forward
CNT30146334Triticum dicoccoidesMedicago truncatula66.4160.8781.98605forward
CNT30440628Triticum dicoccoidesAegilops tauschii36.8845.7897.62336forward
CNT30246955Triticum dicoccoidesAvena sativa92.7647.8890.3845forward
CNT30310418Triticum dicoccoidesCamelina sativa90.7871.2983.43827forward
CNT3059230Triticum dicoccoidesArabidopsis lyrata90.7868.882.83827forward
CNT3077042Triticum dicoccoidesBrassica juncea90.7868.6984.04827forward
CNT30614135Triticum dicoccoidesArabis alpina77.3945.1983.55705forward
CNT30598511Triticum dicoccoidesFraxinus excelsior46.9865.7585.05428forward
CNT30449495Triticum dicoccoidesSaccharum spontaneum91.9968.8686.04838forward
CNT30132437Triticum dicoccoidesLolium perenne92.5470.1386843forward
CNT3011290Triticum dicoccoidesZea mays89.4659.2786.87815forward
CNT30608730Triticum dicoccoidesGossypium raimondii32.935086.33300forward
CNT30647369Triticum dicoccoidesRosa chinensis30.7430.9188.57280forward
CNT30127375Triticum dicoccoidesCorymbia citriodora34.4756.2787.58314forward
CNT30685098Triticum dicoccoidesTriticum urartu53.2432.9996.08485forward
CNT30721807Triticum dicoccoidesTriticum spelta38.9739.4995.77355forward
CNT30350898Triticum dicoccoidesEragrostis tef91.9975.2287.59838forward
CNT30480841Triticum dicoccoidesArabidopsis halleri41.8261.3586.61381forward
CNT30368495Triticum dicoccoidesSorghum bicolor80.4671.9385.27733forward
CNT30355521Triticum dicoccoidesLactuca sativa51.3749.0685.68468forward
CNT30151899Triticum dicoccoidesPrunus persica34.828.7487.38317forward
CNT30427756Triticum dicoccoidesPapaver somniferum91.7764.1182.42836forward
CNT30706337Triticum dicoccoidesPrunus avium87.7168.5282.85799forward
CNT3024873Triticum dicoccoidesPopulus trichocarpa37.3260.2888.82340forward
CNT3037774Triticum dicoccoidesCucumis melo51.5960.888.51470forward
CNT30148140Triticum dicoccoidesBrachypodium distachyon41.7110087.89380forward
CNT30100761Triticum dicoccoidesOryza rufipogon37.5459.6991.52342forward
CNT30585575Triticum dicoccoidesEchinochloa crusgalli37.5466.9391.52342forward
CNT30496962Triticum dicoccoidesDigitaria exilis91.8874.4786.86837forward
CNT30594462Triticum dicoccoidesEragrostis curvula87.4968.4788.08797forward
CNT30603788Triticum dicoccoidesOryza punctata92.3271.3987.75841forward
CNT30176122Triticum dicoccoidesVigna angularis87.7170.5884.73799forward
CNT30113122Triticum dicoccoidesFicus carica46.150.685.24420forward
CNT30724026Triticum dicoccoidesLupinus angustifolius90.1257.0181.97821forward
CNT3050294Triticum dicoccoidesCucumis sativus48.371.7884.77440forward

Expression of CNT30665783

Peptides detected in this lncRNA

>peptide 1 (38 aa)
MAALVTLAPVGSFFSTPLMTPTATVCLMSRTAKRPRGG*

>peptide 2 (53 aa)
MGLVGIIFTIPASPFFRNLGSASSSLPDRLSILVTSSANLTAMWEVWQSNTGA*

>peptide 3 (54 aa)
MVHLNRLDLSCQTSGTKGNNHTRLDDTSLNTANRHSSNATNLVNVLKGKTEGLV*

Sequence

>CNT30665783
CCCAGGAACACTTAACATACACTAAGATTCTCCAAAAAAGACTTGACACTAAAACCTCTGCTAGATAACTCGATGGCAGACACCAGAGCACTCATTTCTT
CTTGATGGCGGCCTTGGTAACCTTGGCACCGGTGGGGTCCTTCTTCTCCACGCCCTTGATGACACCAACAGCAACCGTTTGTCTCATGTCACGCACAGCG
AAGCGGCCAAGAGGAGGGTAGGTGGCGAAGGTCTCCACAACCATGGGCTTGGTGGGAATCATCTTCACGATACCAGCGTCACCGTTCTTCAGGAACTTGG
GCAGCGCCTCCAGCTCCTTACCAGATCGCCTGTCGATCTTGGTCACCAGCTCGGCGAACTTGACAGCAATGTGGGAGGTGTGGCAGTCCAACACTGGGGC
ATAGCCGTTGCCGATCTGACCAGGGTGGTGAAGTTGGCCGCTTCCTTGGCAGGGTCATCCTTGGAGTTGGATGCAACAAAGCCACGCTTCAGATCCTTCA
CAGCAACGTTCTTGACGTTGAAGCCGACGTTGTCACCAGGAAGCGCCTCCAGGAGAGACTCATGGTGCATCTCAACAGACTTGACCTCAGTTGTCAGACC
AGTGGGACCAAAGGTAACAACCATACCAGGCTTGATGACACCAGTCTCAACACGGCCAACAGGCACAGTTCCAATGCCACCAATCTTGTAAACGTCCTGA
AGGGGAAGACGGAGGGGCTTGTCTGAGGGCCTCTTGGGCTCGTTGATCTGGTCAAGAGCCTCAAGAAGGGTAGGGCCCTTGTACCAGTCAAGGTTGGTGG
ACCTCTCAATCATGTTGTCACCCTCAAACCCAGAGATGGGGACAAAGGGAACCTTGTCAGGGTTGTATCCGACCTTCTTCAGGTAGGAAGAGACTTCCTT
GACAATTTCCT