Detailed information on CNT30665732


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30194511Triticum dicoccoidesSecale cereale78.5286.2895.561283forward
CNT30308821Triticum dicoccoidesTriticum aestivum78.6481.997.511285forward
CNT30221809Triticum dicoccoidesHordeum vulgare61.285.6997.21000forward
CNT30400669Triticum dicoccoidesTriticum turgidum78.6482.7498.441285forward
CNT30444207Triticum dicoccoidesAegilops tauschii60.6558.5798.99991forward
CNT30369005Triticum dicoccoidesSorghum bicolor61.1463.6798.3999forward
CNT30117075Triticum dicoccoidesOryza nivara4458.3198.33719forward

Expression of CNT30665732

Peptides detected in this lncRNA

>peptide 1 (55 aa)
MRPSQKSGFVARISSRITTVIRVARTIKQTITNLMSHSQFHSSNWFILAHAWLNL*

>peptide 2 (30 aa)
MMRRRHEGRAIRRVIMNHRISEQSPRQPFI*

>peptide 3 (35 aa)
MCQAHEATPQALFGRSGTPNGRPPRGNNYLKHHFP*

>peptide 4 (32 aa)
MKYECPRLSLLIITPIPKANTIGPESYDVIPC*

>peptide 5 (31 aa)
MRLVANKRSNQPSLRPCRAREDHLHEGVLQGQ

>peptide 6 (53 aa)
MMLSHANVSRAMACFEHSNFFKVTMPETRPGQLRLGARCRPKGPTTSFLTATT*

>peptide 7 (44 aa)
MLSQLFVFHKSKNFTSDYEIRMPPTVPINHYSDPEGQHNRTGIL*

>peptide 8 (41 aa)
MRPVLLFIVTTSPCQDWVICAPAAFLGCGSRFSGSLSGIEP*

>peptide 9 (39 aa)
MPAEGSNYELFNCNNLNIRYWSWNYRGCWHQTCPPMDPR*

Sequence

>CNT30665732
GTCGGCATCGTTTATGGTTGAGACTAGGACGGTATCTGATCGTCTTCGAGCCCCCAACTTTCGTTCTTGATTAATGAAAACATCCTTGGCAAATGCTTTC
GCAGTTGTTCGTCTTTCATAAATCCAAGAATTTCACCTCTGACTATGAAATACGAATGCCCCCGACTGTCCCTATTAATCATTACTCCGATCCCGAAGGC
CAACACAATAGGACCGGAATCCTATGATGTTATCCCATGCTAATGTATCCAGAGCGATGGCTTGCTTTGAGCACTCTAATTTCTTCAAAGTAACGATGCC
GGAAACACGACCCGGCCAATTAAGGCTAGGAGCGCGATGCCGGCCGAAGGGTCCAACTACGAGCTTTTTAACTGCAACAACTTAAATATACGCTATTGGA
GCTGGAATTACCGCGGCTGCTGGCACCAGACTTGCCCTCCAATGGATCCTCGTTAAGGGATTTAGATTGTACTCATTCCAATTACCAGACACTAATGCGC
CCGGTATTGTTATTTATTGTCACTACCTCCCCGTGTCAGGATTGGGTAATTTGCGCGCCTGCTGCCTTCCTTGGATGTGGTAGCCGTTTCTCAGGCTCCC
TCTCCGGAATCGAACCCTAATTCTCCGTCACCCGTCACCACCATGGTAGGCCCCTATCCTACCATCGAAAGTTGATAGGGCAGAAATTTGAATGATGCGT
CGCCGGCACGAAGGCCGTGCGATCCGTCGAGTTATCATGAATCATCGGATCAGCGAGCAGAGCCCGCGTCAGCCTTTTATCTAATAAATGCGCCCCTCCC
AGAAGTCGGGGTTTGTTGCACGTATTAGCTCTAGAATTACTACGGTTATCCGAGTAGCACGTACCATCAAACAAACTATAACTAATTTAATGAGCCATTC
GCAGTTTCACAGTTCAAATTGGTTCATACTTGCACATGCATGGCTTAATCTTTGAGACAAGCATATGACTACTGGCAGGATCAACCAGGTAGCACGTCCT
TGGTGACTACCAGCACGGCCATCGTCCTGCGCTTCCACTTTCGTGGAAACTCAGAGGCAACAGCCGGGCCGGTTGTCGCTCTTGAGCGGCACAGCTCATC
GTCCTTGAGGATCGGCGCAGAGAGTTGCGTATCCTACCACGTAACTGTGGAGAGGTAGAGGCAACTCCTGTTCCGGTTGTTCTCAGTTCACAGAGCTTTG
GGTCGGGTCGAGGCAACCAAATGGGCCACGCCCCTTTATCGTGAGCAGCATCCCAGACCAAAAGCGGGAGCGAGGTTGCCTTGATAGCAACGGGCACGTA
ATGTGCCAGGCCCACGAGGCAACGCCGCAAGCGCTATTTGGCCGCAGCGGCACACCCAATGGGCGTCCGCCGCGAGGCAACAATTATCTGAAGCACCACT
TCCCGTAGGTCGGGTACTAGCACGCAAGCACTCTTAATCCAGCGATTCGAAGCCACACGAGGGACGGGACACGGCGCCGGTAGTCGGCCGTAGTACAACG
GGGGATCTACCGGCAGACACGGGTCCAAAGCTACTCATGCGCTTAGTAGCCAACAAGCGGTCAAACCAACCAAGCCTCCGCCCGTGCAGAGCACGAGAGG
ATCACTTGCACGAAGGCGTCCTGCAAGGCCAAAT