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Detailed information on CNT30665503


BLAST search results

BLAST vs Swiss-Prot:
sp|P04784|CB21_WHEAT, E-value = 6e-179

BLAST vs NONCODE:
NONMTRT001605, E-value = 6e-26

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30187726Triticum dicoccoidesSecale cereale64.0810094.27628forward
CNT30300127Triticum dicoccoidesTriticum aestivum10093.5198.98980forward
CNT30394300Triticum dicoccoidesTriticum turgidum94.4979.7698.6926forward

Expression of CNT30665503

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MACTKKPNMENIARFSSGPLPVTMACTKKPNMENIARRPFLISLTLSSVNASGSSARPSGSKLPPG*

>peptide 2 (50 aa)
MVTRASPKRNDDGRFFTALPAKAGEESDMVVAAILIDGGSMCSPRMRSGCG

>peptide 3 (38 aa)
MPQGRRQGRADQSCRPGRAGQRSHRAVHRQCGSPQRRP*

>peptide 4 (29 aa)
MAQRQWITSSSRFLAKVSGSADSPAVSQP*

>peptide 5 (32 aa)
MTDSTLLARNKVGGKCPCVVVDRVGEVVSEVL*

Sequence

>CNT30665503
ATCCTCGTAATTTACATCATGGTAGTACAACTTGGACTGCACAATGACTGACTCCACCTTACTTGCCCGGAACAAAGTTGGTGGCAAATGCCCATGCGTT
GTTGTTGACAGGGTCGGAGAGGTGGTCAGCGAGGTTCTCTAGTGGACCCTTGCCGGTGACGATGGCTTGCACAAAGAAACCGAACATGGAAAACATAGCG
AGGTTCTCTAGTGGACCCTTGCCGGTGACGATGGCTTGCACAAAGAAACCGAACATGGAAAACATAGCGAGGCGACCGTTCTTGATCTCCTTAACCTTGA
GCTCGGTGAATGCCTCAGGGTCGTCGGCAAGGCCGAGCGGATCAAAGCTGCCGCCCGGGTAGAGCGGGTCAACGATCTCACCGAGCGGTCCACCGGCAAT
GCGGTAGCCCTCAACGGCGCCCATGAGCACGACCTGACAAGCCCAGATGGCAAGGATACTTTGTGCGTGCACAAGGCTTGGGTTGCCCAGGTAGTCGAGG
CCGCCCTCGCTGAAGATCTGGGATCCAGCCTTGAACCAAACAGCCTCGCCGAACTTCACACCATTGCGGGCGAGAAGCTCGGGGAAGACGCAACCGAGCG
CGCCAAGCATGGCCCAACGGCAGTGGATCACCTCCAGCTCGCGGTTCTTGGCGAAGGTCTCGGGGTCGGCCGACAGCCCAGCGGTGTCCCAGCCGTAGTC
GCCAGGGAACTCACCAGTGAGGTAGCTCGGGGGCTCGCCAGAAAGTGGGCCGAGGTAGAGCACGCGGTCAGAGCCGTACCACGGGCTGCCGGAGGCAACC
TGCTTGGCCTTTGCCGCTGTCTTGCGCATGGTGACGCGAGCCTCCCCGAAAAGAAACGACGATGGCAGGTTCTTCACTGCCTTGCCGGCAAAGGCTGGGG
AAGAGAGTGACATGGTGGTTGCAGCCATTCTGATCGATGGAGGTTCTATGTGTTCTCCAAGAATGAGGAGTGGGTGTGGA