Detailed information on CNT30665325


BLAST search results

BLAST vs Swiss-Prot:
sp|P12331|CB22_ORYSJ, E-value = 2e-133

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30251114Triticum dicoccoidesAvena sativa77.5664.594.66674forward
CNT30471514Triticum dicoccoidesSaccharum spontaneum69.5171.8292.22604forward
CNT3011490Triticum dicoccoidesZea mays69.7467.6390.92606forward
CNT30129909Triticum dicoccoidesCorymbia citriodora61.917491.82538forward
CNT30596906Triticum dicoccoidesOryza meridionalis64.6757.4192.35562forward

Expression of CNT30665325

Peptides detected in this lncRNA

>peptide 1 (34 aa)
LALTCNIYQSGLLNLTTGRSRDRRRHTCSSIHQP*

>peptide 2 (37 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIANFE*

>peptide 3 (29 aa)
MAQRQWITSSSRFLAKVSGSAERPAVSQP*

>peptide 4 (61 aa)
SRSHATSISPDYSISQREEAEIDDDTHAAASISHEVVGLEVELTALTCRGRSWWRRPRRCC*

>peptide 5 (38 aa)
RAHMQHLSVRTTQSHNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 6 (46 aa)
MAWTKKPNMENMARRPFLISFTLSSANASGSSARMLCACTRLGLPR*

Sequence

>CNT30665325
CTCGCGCTCACATGCAACATCTATCAGTCCGGACTACTCAATCTCACAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGC
CATGAAGTTGTCGGCCTAGAGGTTGAGCTGACCGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAG
GTGGTCGGCGAGGTTCTCCAGGGGCCCCTTGCCGGTGACGATGGCCTGGACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCC
TTCACCTTGAGCTCCGCGAACGCCTCGGGGTCCTCGGCGAGGATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGA
AGATCTGGGAGCCGGCCTTGAACCACACGGCCTCGCCGAACTTGACGCCGTTGCGGGCGAGCAGCTCCGGGAAGACGCAGCCGAGCGCGCCGAGCATGGC
CCAGCGGCAGTGGATCACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGAGAGGCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCG
CCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGC
CCGCCGTCTTGCGCATGGTGATGCGGCCCTCCCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGT
CGCGGCCGCCATTGCTAACTTCGAGTGAGCTGAGGCTGACAGTAGGAGGCGCTGGTGGTCGTTGGTGAC