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Detailed information on CNT30665098


BLAST search results

BLAST vs Swiss-Prot:
sp|P12329|CB21_MAIZE, E-value = 4e-126

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696066Triticum dicoccoidesOryza sativa67.4167.8389.01546forward
CNT30186790Triticum dicoccoidesSecale cereale87.975.7496.77712forward
CNT30552192Triticum dicoccoidesOryza glaberrima68.2766.6392.04553forward
CNT30251359Triticum dicoccoidesAvena sativa76.7965.3493.41622forward
CNT30685008Triticum dicoccoidesTriticum urartu101.4885.4598.05822forward
CNT30582321Triticum dicoccoidesEchinochloa crusgalli61.4852.3191.57498forward

Expression of CNT30665098

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGGRWCC

>peptide 2 (29 aa)
MAQRQWMTSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (51 aa)
DYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCC*

Sequence

>CNT30665098
GACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGA
CGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGACGGGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAG
AGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCT
GCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGTCGAGGCCGCCCTCGCTGAAGATCTGGGAGCCGGCCTTGAACCAGACGGCCTCGCCGAACTTGACGCC
GTTGCGGGCGAGCAGCTCGGGGAAGACGCAGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCG
GGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGAGCACGCGGTCGGAGCCGTACCACGGGCTGCTGGACG
CCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGG
GGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCGT
TGGTGCTGTG