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Detailed information on CNT30664980


BLAST search results

BLAST vs Swiss-Prot:
sp|P07398|RBS3_WHEAT, E-value = 5e-46

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30371423Triticum dicoccoidesOryza glumipatula52.6443.4683.95299forward

Expression of CNT30664980

Peptides detected in this lncRNA

>peptide 1 (97 aa)
YFPLVTIKTYIVDILYNIMRPCIYIATDSIHIRACFLEPCWYMNMDIHIFLGTNKKDKWRRKTQSNVRVDKTAMALYIWPVVSELFRPCRTPRSPVA*

>peptide 2 (79 aa)
MLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPSHPLGADQVVDLLEEGLRAERWQVRQGLELLDALDG

Sequence

>CNT30664980
GATATTTTCCATTGGTTACCATTAAAACGTATATAGTTGACATATTGTATAATATTATGCGTCCGTGCATATACATAGCCACCGATAGCATTCACATACG
AGCATGCTTTCTCGAGCCATGTTGGTACATGAACATGGACATACACATATTCTTAGGAACAAATAAGAAAGATAAATGGAGAAGGAAAACCCAAAGCAAT
GTCAGAGTTGACAAAACTGCAATGGCACTTTATATATGGCCTGTCGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGC
GATGAAGCTGACGCACTGCACCTGACGCATGTTGTCGAATCCGATGATGCGGACATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATC
ACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAATACCGGCCATCGCACCCACTTGGAGCGGATCAGGTAGTCGACCTGCTTG
AGGAGGGCCTCCGTGCTGAGCGGTGGCAGGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCGATGGG