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Detailed information on CNT30664908


BLAST search results

BLAST vs Swiss-Prot:
sp|P04781|CB23_PETSP, E-value = 4e-62

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30685781Triticum dicoccoidesTriticum urartu100.7296.2295.83839forward

Expression of CNT30664908

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLPVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (74 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSARPRGLGLPSAPSMAQRQWMTSSSRFLAKVSGSADSPAVSQP*

>peptide 3 (54 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGG

Sequence

>CNT30664908
AGAGAGACAAGTAGTTAACCAGAAGACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAA
CTCCTCATCTCGACTCGCCCTCACATGCAACATCTACCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGC
AGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACGGCGCTCACTTGCCGGGGACGAAGTTGGTGGTCGGCGAGGTTCTCGAGGGGGCCC
TTGCCGGTGACGATGGCCTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGG
GGTCCTCGGCGAGGCCCAGGGGGCTGGGGTTGCCGAGCGCGCCGAGCATGGCCCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTC
GGGGTCGGCGGACAGCCCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGC
ACGCGGTCGGAGCCGTACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCC
TGGAGGCCTTCACCGGGGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGA
GCTGAGGCTGGCAGTGGGAGGCGCTGGTGGTCG