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Detailed information on CNT30664845


BLAST search results

BLAST vs Swiss-Prot:
sp|P13192|PSAF_HORVU, E-value = 2e-110

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678495Triticum dicoccoidesSetaria viridis33.5650.6391.04201forward
CNT30522442Triticum dicoccoidesSetaria italica26.0419.1492.31156forward
CNT30298665Triticum dicoccoidesTriticum aestivum78.4672.6495.32470forward
CNT30562391Triticum dicoccoidesActinidia chinensis68.6145.2177.62411forward
CNT308929Triticum dicoccoidesZea mays41.5782.7295.58249forward
CNT30684883Triticum dicoccoidesTriticum urartu55.5955.3299.4333forward
CNT30349302Triticum dicoccoidesEragrostis tef32.5535.1492.31195forward
CNT30148341Triticum dicoccoidesBrachypodium distachyon34.0669.6296.08204forward
CNT30579105Triticum dicoccoidesEchinochloa crusgalli59.4333.7192.98356forward

Expression of CNT30664845

Peptides detected in this lncRNA

>peptide 1 (31 aa)
MKPLGMILAASSTSMMISLMAGFFSPLTAMR*

>peptide 2 (69 aa)
MVAWMASAGAESGAYFLSDELSFFTDCFSRLANALDSLHGVRPAMSAAAGGGEVAMEAVRAAIAAASGVS

Sequence

>CNT30664845
CACCTGAGTTGGGACCGACTAGCCAACCACGCACGCATGGCCGCTGATTAGTAGCCGATGTCGGCGTCGTCTACGACGAGGTCGCCGTTGATGAGCTCGC
GGTAGGCGGCGACGGGCCAGATGAAGCCCCTGGGGATGATCCTGGCGGCGAGCTCGACGTCGATGATGATCTCCCTCATGGCGGGCTTCTTCTCGCCGCT
GACGGCGATGAGGTAGCTGCGGCCGACCCACCCGATCCAGCCGGCGATGTAGAGGAAGAGCACGCCGGGGGTGATGAACTCGCCCCAGTGCCGCTGGTCG
CCGCTGACGATGAGGTGGGGCAGGCCGTCGGAGCCGCAGAGCAGGCCGAACTTGCCGTAGTTCTCAAACCGGCGCTTGGTCTTCTCGATGGTGGCCTGGA
TGGCGAGCGCGGGGGCCGAGTCGGGCGCGTACTTCTTGAGCGACGAGTTGAGCTTCTTCACCGACTGCTTCTCCCGCTTGGCGAACGCCTTGGACTCCTT
GCACGGGGTCAGGCCCGCGATGTCGGCGGCAGCCGGCGGCGGGGAGGTGGCGATGGAGGCGGTGAGGGCGGCCATTGCTGCTGCGTCCGGCGTGTCCTT