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Detailed information on CNT30664831


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 3e-78

BLAST vs NONCODE:
NONVVIT001317, E-value = 3e-17

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30186769Triticum dicoccoidesSecale cereale77.8764.2697.14489forward
CNT30300848Triticum dicoccoidesTriticum aestivum87.187.196.71547forward
CNT30224976Triticum dicoccoidesHordeum vulgare80.162.2595.63503forward
CNT30393514Triticum dicoccoidesTriticum turgidum85.9976.1699.81540forward
CNT30555700Triticum dicoccoidesOryza glaberrima51.9135.4386.5326forward
CNT30685331Triticum dicoccoidesTriticum urartu89.3382.9999.64561forward
CNT30721718Triticum dicoccoidesTriticum spelta67.3693.7999.76423forward
CNT30578501Triticum dicoccoidesOryza barthii51.9129.0686.5326forward

Expression of CNT30664831

Peptides detected in this lncRNA

>peptide 1 (79 aa)
MCMCIYIATDCIHIRACFLEPCWYMNMDIHIFLGTNKKDKWRRKTQSNVRVDKTAMALYMWPVVSELFRPCRTPRSPVA*

>peptide 2 (54 aa)
MKLTHCTWRMLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

Sequence

>CNT30664831
GCGGTGCCAAAGATGTTTCTCATTATTAATTACCCGAATACATAGTCGACAGATTGTATAAATATATTATGTGCATGTGCATATACATAGCCACCGATTG
CATTCACATACGAGCATGCTTTCTCGAGCCATGTTGGTACATGAACATGGACATACACATATTCTTAGGAACAAACAAGAAAGATAAATGGAGAAGGAAA
ACCCAAAGCAATGTCAGAGTTGACAAAACCGCAATGGCACTTTATATGTGGCCCGTGGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGG
TGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGGCGCATGTTGTCGAATCCGATGATGCGGACGTACGCGTCAGGGTACTCCTTCTTGACCTCTTCC
ACCTCGTTGATCACCTGTGTGGCGTCGGTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTACCGGCCATCGTAGTACCCAGGGGATGCGTTGTGCT
CACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCCATTTGGAGCGGATCAGGTAGGACAGGGTCTCGAACTTCTTGATGCCCTCGATGGG
CCACACCTGCAAATCAGATTGACATTTT