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Detailed information on CNT30664821


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30298208Triticum dicoccoidesTriticum aestivum10075.29100716forward

Expression of CNT30664821

Peptides detected in this lncRNA

>peptide 1 (78 aa)
MPPFPSWTDQIPWRRWGTAGHAAGWLQHCFAGMPQEAVQAHIKTGARCTLAGQRLQIQDTTTNLWMKSQELLPCRRTP*

>peptide 2 (28 aa)
MGSTRPRVGRWLALHDSACRDPSRRAHPE

>peptide 3 (45 aa)
MHTRRTEVTDSRHNNKPMDEVAGAPSMPKNTVDAGPRERAILCRS*

>peptide 4 (45 aa)
MRPAGCSTASLGCRKRPCRRTSRREPDAHSPDRGYRFKTQQQTYG*

Sequence

>CNT30664821
CGCCGCGGACGCTTCGAGCTAGTACTACCATTATTCCACTGAACTAAGCTCCGTGAGTGAGAGAGATAGAGAGTTCCAGAAAGTGAGGTCCGCCGTCCGG
CAGCGTCGTGGTCGTGGCGAGCGACAGAGGGAGCAGCCGCGGCTGCCGCTGCCTGACTCCGGCGCGCCCAAGCCCCGGCCAAGGCTGGAGCAGCTGCTCT
GGCATGCCGCCATTCCCCTCCTGGACCGACCAGATCCCTTGGAGAAGGTGGGGAACTGCAGGGCATGCGGCCGGCTGGCTGCAGCACTGCTTCGCTGGGA
TGCCGCAAGAGGCCGTGCAGGCGCACATCAAGACGGGAGCCAGATGCACACTCGCCGGACAGAGGTTACAGATTCAAGACACAACAACAAACCTATGGAT
GAAGTCGCAGGAGCTCCTTCCATGCCGAAGAACACCGTAGATGCTGGTCCACGTGAGAGGGCAATTCTCTGCCGATCCTGATCTATTCTCGTGTGATCCA
CAATGGAGTAGATAGATAGGAGAAAGAATGTTGGAGATTTTGGCGGCAATCTGTTGATACGCGCGAGAAAGAAAGGCAGTTTTACTGATTTTATGTAATT
AGAGAGATACGGGCTGGTTGTTTTAGTGATGGGGTCCACCAGGCCACGTGTTGGCCGCTGGTTGGCCCTGCACGATAGTGCGTGCAGGGATCCCAGCAGG
AGAGCCCATCCGGAGG