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Detailed information on CNT30664801


BLAST search results

BLAST vs Swiss-Prot:
sp|Q9SU33|ERLL3_ARATH, E-value = 2e-15

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696568Triticum dicoccoidesOryza sativa27.810.4987.3687forward
CNT30676135Triticum dicoccoidesSetaria viridis21.4117.8291.0467forward
CNT30522474Triticum dicoccoidesSetaria italica21.4113.988.0667forward
CNT30187034Triticum dicoccoidesSecale cereale21.7314.3592.6568forward
CNT30308206Triticum dicoccoidesTriticum aestivum23.9612.468875forward
CNT30226858Triticum dicoccoidesHordeum vulgare23.9626.6989.3375forward
CNT30589645Triticum dicoccoidesMusa acuminata29.7117.1683.8793forward
CNT30553011Triticum dicoccoidesOryza glaberrima25.889.2986.4281forward
CNT30439566Triticum dicoccoidesAegilops tauschii51.7626.3494.44162forward
CNT3016434Triticum dicoccoidesZea mays21.0912.587.8866forward
CNT3067127Triticum dicoccoidesLeersia perrieri23.328.3187.6773forward
CNT30685047Triticum dicoccoidesTriticum urartu22.0413.0489.8669reverse complement
CNT30348038Triticum dicoccoidesEragrostis tef21.0912.2989.3966forward
CNT30596930Triticum dicoccoidesOryza meridionalis23.648.3689.1974forward
CNT30369753Triticum dicoccoidesOryza glumipatula23.648.1589.1974forward
CNT30105270Triticum dicoccoidesOryza longistaminata23.9614.4586.6775forward
CNT30100835Triticum dicoccoidesOryza rufipogon21.4115.1989.5567forward
CNT30575558Triticum dicoccoidesOryza barthii23.6410.2189.1974forward
CNT30116352Triticum dicoccoidesOryza nivara23.648.8589.1974forward
CNT30593752Triticum dicoccoidesEragrostis curvula26.26.8691.4682forward

Expression of CNT30664801

Peptides detected in this lncRNA

>peptide 1 (89 aa)
GDVEDDAEDVGLERGAEAHGGLEVGQAAEEAAALVAAAAGGLADAHVHQAGGGVWCLQLPQASPARNVLATSSASRHAAEKVLDAIAAG*

>peptide 2 (90 aa)
GMLRTMPRTLALSAVQRHTAASRSARPPRRLQHLSPPPLGGLPTPTFTRPAAGFGACSCRRHRRRGTCWPPAAPAGTPPRRSWTPLLPAS*

Sequence

>CNT30664801
CGGGGATGTTGAGGACGATGCCGAGGACGTTGGCCTTGAGCGCGGTGCAGAGGCACACGGCGGCCTCGAGGTCGGCCAGGCCGCCGAGGAGGCTGCAGCA
CTTGTCGCCGCCGCCGCTGGGGGGCTTGCCGACGCCCACGTTCACCAGGCCGGCGGCGGGGTTTGGTGCTTGCAGCTGCCGCAGGCATCGCCGGCGAGGA
ACGTGTTGGCCACCAGCAGCGCCAGCAGGCACGCCGCCGAGAAGGTCCTGGACGCCATTGCTGCCGGCTAGCTAGTAGGTACTGCTGGTGAGAGTGAGCT
AGGAGGGTTTAAG