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Detailed information on CNT30664619


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 3e-92

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30578479Triticum dicoccoidesOryza barthii42.9641.383.73375forward

Expression of CNT30664619

Peptides detected in this lncRNA

>peptide 1 (29 aa)
MYTLTDYNSSSAHIRWSSRLNCVLIDVGI*

>peptide 2 (45 aa)
MLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

>peptide 3 (49 aa)
IFLGTNKKDKWRRKTQSNVRVDKTAMALYIWPVVSELFRPCRTPRSPVA*

>peptide 4 (59 aa)
MSRKTETMLFTCMHLILPPLLTLPRLAPLERRLTGRPAERRRWPTRPSRWGPWLYYVGI*

Sequence

>CNT30664619
ATATTCTTAGGAACAAATAAGAAAGATAAATGGAGAAGGAAAACCCAAAGCAATGTCAGAGTTGACAAAACTGCAATGGCACTTTATATATGGCCTGTCG
TGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCACTGCACCTGACGCATGTTGTCGAATCCGATG
ATGCGGACATACGCGTCAGGGTACTCCTTCTTGACCTCCTCCACCTCGTTGATCACCTGTGTGGCGTCAGTGCACCCGAACATAGGCAGCTTCCACATTG
TCCAATACCGGCCATCGTAGTACCCAGGAGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGAACTCGAGGCAAGGCACCCACTTGGAGCGGAT
CAGGTAGTCGACCTGCTTGAGGAGGGCCTCCGTGCTGAGCGGTGGCAGGTAAGACAGGGTCTCGAACTTCTTGATGCCCTCGATGGGCCACACCTGCAAA
TCAGATTGACAGTCATGTATACATTAACAGACTATAACTCTAGTTCTGCACATATCAGATGGAGTAGCCGGCTAAATTGTGTGCTGATTGACGTCGGGAT
TTGAAACTATTGTATGTAATTGACCATATGAAAGTTCACATATGATTGTTATTGTCTTCCGTGAGGTAGAAAATGAGTAGAAAGACAGAGACGATGTTGT
TTACCTGCATGCACCTGATCCTTCCACCGTTGCTGACGCTGCCGAGGCTAGCGCCGTTGGAGCGGCGGCTGACGGGGAGGCCGGCGGAGCGACGGAGGTG
GCCGACGAGGCCATCACGGTGGGGGCCATGGCTGTACTATGTAGGTATATAGCTTGCTAGGAGGAGGCACTCT