Detailed information on CNT30664567


BLAST search results

BLAST vs Swiss-Prot:
sp|P10707|CB2D_SOLLC, E-value = 2e-66

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30297772Triticum dicoccoidesTriticum aestivum71.8561.9999.83587forward
CNT30589591Triticum dicoccoidesMusa acuminata37.8254.7992.88309forward
CNT30345523Triticum dicoccoidesEragrostis tef62.1856.3890.16508forward

Expression of CNT30664567

Peptides detected in this lncRNA

>peptide 1 (43 aa)
MACTKKPNMENMARRPFLISFTLSSAKASGSSARPRGSKLPPG*

>peptide 2 (63 aa)
ATSTSPDYSISEREEAEIDDDTHAAASISHEVVGLELELTALTCRGRSWWRRPRRCSRGGPCR*

>peptide 3 (54 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGG

>peptide 4 (30 aa)
CNIYQSGLLNLRTGRSRDRRRHTCSSIHQP*

>peptide 5 (34 aa)
QHLPVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

Sequence

>CNT30664567
TGCAACATCTACCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGCAGCATCCATCAGCCATGAAGTTGTC
GGCCTAGAGCTTGAGCTGACGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTCTCGAGGGGGCCCTTGCCGGTGACGATGGC
CTGCACGAAGAAGCCGAACATGGAGAACATGGCGAGGCGGCCGTTCTTGATCTCCTTCACCTTGAGCTCCGCGAAGGCCTCGGGGTCCTCGGCGAGGCCC
AGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGCGCCCATGAGCACCACCT
GGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGCGGCAGTGGATGACCTCCAGCTCCCGGTTCTTGGCGAAGGTCTCGGGGTCGGCGGACAGC
CCCGCGGTGTCCCAGCCGTAGTCGCCGGGGAACTCGCCGGTGAGGTAGCTCGGGGGGTCGCCGGAGAGCGGGCCGAGGTAGAGCACGCGGTCGGAGCCGT
ACCACGGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGG
GGTGCCGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGTG
GGAGGCGCTGGTGGTCG