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Detailed information on CNT30664555


BLAST search results

BLAST vs Swiss-Prot:
sp|P13192|PSAF_HORVU, E-value = 7e-73

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30678624Triticum dicoccoidesSetaria viridis14.1521.0790.6775forward
CNT30224070Triticum dicoccoidesHordeum vulgare23.455.6199.19124forward
CNT30349983Triticum dicoccoidesEragrostis tef10.5722.8696.4356forward
CNT30620828Triticum dicoccoidesCajanus cajan19.8147.9583.81105forward

Expression of CNT30664555

Peptides detected in this lncRNA

>peptide 1 (90 aa)
MVAWMASAGAESGAYFLSDELSFFTDCFSRLANALDSLHGVRPAMSAAAGGGEVAAEERRTEESARAAEKVLMEAEREGVVAAIAAASGVS

Sequence

>CNT30664555
CACCTGAGTTGGGACCGACTAGCCAACCACGCACGCATGGCCGCTGATTAGTAGCCGATGTCGGCGTCGTCTACGACGAGGTAGCTGCGGCCGACCCACC
CGATCCAGCCGGCGATGTAGAGGAAGAGCACGCCGGGGGTGATGAACTCGCCCCAGTGCCGCTGGTCGCCGCTGACGATGAGGTGGGGCAGGCCGTCGGA
GCCGCAGAGCAGGCCGAACTTGCCGTAGTTCTCAAACCGGCGCTTGGTCTTCTCGATGGTGGCCTGGATGGCGAGCGCGGGGGCCGAGTCGGGCGCGTAC
TTCTTGAGCGACGAGTTGAGCTTCTTCACCGACTGCTTCTCCCGCTTGGCGAACGCCTTGGACTCCTTGCACGGGGTCAGGCCCGCGATGTCGGCGGCAG
CCGGCGGCGGGGAGGTGGCGGCGGAGGAGAGGAGGACGGAGGAGAGCGCCAGGGCCGCCGAGAAGGTCTTGATGGAGGCGGAGAGGGAGGGGGTGGTGGC
GGCCATTGCTGCTGCGTCCGGCGTGTCCTT