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Detailed information on CNT30664530


BLAST search results

BLAST vs Swiss-Prot:
sp|P08834|NU1M_CITLA, E-value = 5e-36

BLAST vs NONCODE:
NONORUT000338, E-value = 2e-112

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30690827Triticum dicoccoidesOryza sativa10012.9899.44358forward
CNT30501657Triticum dicoccoidesCoffea canephora101.687.491.76364forward
CNT30187493Triticum dicoccoidesSecale cereale10078.8599.72358forward
CNT30220178Triticum dicoccoidesHordeum vulgare33.244.8299.16119forward
CNT30401101Triticum dicoccoidesTriticum turgidum10029.42100358forward
CNT30592620Triticum dicoccoidesMusa acuminata99.7215.791.88357forward
CNT30437037Triticum dicoccoidesAegilops tauschii76.5479.1998.91274forward
CNT30598800Triticum dicoccoidesFraxinus excelsior83.2480.1192.95298forward
CNT30228621Triticum dicoccoidesAnanas comosus67.0457.6998.33240reverse complement
CNT30207841Triticum dicoccoidesHelianthus annuus103.3513.8189.46370forward
CNT30687453Triticum dicoccoidesTriticum urartu1006.798.88358forward
CNT30480890Triticum dicoccoidesArabidopsis halleri77.9383.7892.47279forward
CNT30354619Triticum dicoccoidesLactuca sativa101.6821.8591.21364forward
CNT30574571Triticum dicoccoidesVitis vinifera68.72491.87246forward
CNT3052251Triticum dicoccoidesAmborella trichopoda24.861.5297.7589forward
CNT3099667Triticum dicoccoidesOryza rufipogon67.0410.47100240forward
CNT30115707Triticum dicoccoidesOryza nivara1008.2299.44358forward
CNT30557320Triticum dicoccoidesPanicum hallii10080.6399.44358forward
CNT30335348Triticum dicoccoidesCynara cardunculus93.8592.8291.07336forward

Expression of CNT30664530

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MNRTSTSSVTPTALTALYPNPTCSGPGSSRISSSVSG

>peptide 2 (48 aa)
RRGIRNITNTGNKGIPDHICFCAMTISLELQGPTHISTVIRIRPIETS*

Sequence

>CNT30664530
CTAGACGAGGAATAAGGAACATAACCAATACGGGGAACAAGGGAATACCGGACCATATCTGCTTTTGCGCCATGACAATCTCACTCGAATTACAGGGACC
TACACATATTAGTACAGTAATAAGAATAAGACCAATAGAGACTTCATAAGGGACCATTTGAGCTGCAGATCGTAATGCTCCTAGAAAGGCATATTTCGAA
TATAGAGGACGTTCCCAACAATCCACGAGAATATCATACCCAACTATGAACCGTACGAGCACATCCTCTGTCACCCCCACCGCGCTTACGGCTCTATACC
CCAACCCAACTTGCTCTGGCCCTGGGTCCTCCCGCATCTCTTCCTCGGTAAGCGGACC