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Detailed information on CNT30664522


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40004|RBS_HORVU, E-value = 2e-89

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30721860Triticum dicoccoidesTriticum spelta82.5983.4598.33479forward
CNT30351769Triticum dicoccoidesEragrostis tef58.139.7981.6337forward

Expression of CNT30664522

Peptides detected in this lncRNA

>peptide 1 (54 aa)
MKLTHCTWRMLSNPMMRTYASGYSFLTSSTSLITCVASVHPNIGSFHIVQYRPS*

>peptide 2 (59 aa)
PCWYMNMDIHIFLGTNKKDKWRRKTQSNVRVDKTAMALYMWPVVSELFRPCRTPRSPVA*

Sequence

>CNT30664522
GCCATGTTGGTACATGAACATGGACATACACATATTCTTAGGAACAAACAAGAAAGATAAATGGAGAAGGAAAACCCAAAGCAATGTCAGAGTTGACAAA
ACCGCAATGGCACTTTATATGTGGCCCGTGGTGAGTGAGCTGTTTAGGCCTTGCCGGACTCCTCGCAGCCCGGTGGCTTGAAGGCGATGAAGCTGACGCA
CTGCACCTGGCGCATGTTGTCGAATCCGATGATGCGGACGTACGCGTCAGGGTACTCCTTCTTGACCTCTTCCACCTCGTTGATCACCTGTGTGGCGTCG
GTGCACCCGAACATAGGCAGCTTCCACATTGTCCAGTACCGGCCATCGTAGTACCCAGGGGATGCGTTGTGCTCACGGAAGATGAACCCAACCTTGCTGA
ACTCGAGGCAAGGCACCCATTTGGAGCGGATCAGGTAGTCGACCTGCTTGAGGAGGGCCTCCGTACTGAGCGGTGGCAGGTAGGACAGGGTCTCGAACTT
CTTGATGCCCTCGATGGGCCATCACGGTGGGGGCCATGGCTGTGCTATGTAGGTATATAGCTTGCTAGGAGGAGGCACTC