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Detailed information on CNT30664426


BLAST search results

BLAST vs Swiss-Prot:
sp|P08222|CB22_CUCSA, E-value = 7e-38

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30188236Triticum dicoccoidesSecale cereale57.1862.3996.41418forward
CNT30225034Triticum dicoccoidesHordeum vulgare46.9257.0796.5343forward
CNT30393592Triticum dicoccoidesTriticum turgidum97.1310099.72710forward
CNT30250161Triticum dicoccoidesAvena sativa44.7347.1292.66327forward
CNT30685015Triticum dicoccoidesTriticum urartu93.1697.797.65681forward
CNT30603508Triticum dicoccoidesOryza punctata43.6440.8592.16319forward

Expression of CNT30664426

Peptides detected in this lncRNA

>peptide 1 (35 aa)
MQHLPVRTTQSQNGKKQRSTTTHMQQHPSAMKLSA*

>peptide 2 (61 aa)
MVMRPSPKGAALEAFTGVPAIAGEESAMVAAAIARCVLAGFASGELRLAVGGAGGRWCCGVK

Sequence

>CNT30664426
AGAGAGACAAGTAGTTAACCAGAAGACAGAGATGCCTTGATTAATCTGAGAAAATAGCCAGATATTACACAAACACCATCTTGTAGTGTACACACACCAA
CTCCTCATCTCGACTCGCCCTCACATGCAACATCTACCAGTCCGGACTACTCAATCTCAGAACGGGAAGAAGCAGAGATCGACGACGACACACATGCAGC
AGCATCCATCAGCCATGAAGTTGTCGGCCTAGAGCTTGAGCTGACGGCGCTCACTTGCCGGGGACGAAGTTGGTGGCGAAGGCCCAGGCGTTGTTGTTGA
CGGGGTCGGCGAGGCCCAGGGGGTCGAAGCTGCCGCCGGGGTAGAGCGGGTCCACGATCTCGCCCAGCGGGCCGCCGGCGACGCGGTAGCCCTCCACGGC
GCCCATGAGCACCACCTGGCAGGCCCAGATGGCGAGGATGCTCTGCGCGTGCACCAGGCTGGGGTTGCCGAGGTAGAGCACGCGGTCGGAGCCGTACCAC
GGGCTGCTGGACGCCGCCACCTTGGGCTTGCCCGCCGTCTTGCGCATGGTGATGCGGCCCTCGCCGAAGGGCGCCGCCCTGGAGGCCTTCACCGGGGTGC
CGGCCATCGCCGGGGAGGAGAGCGCCATGGTCGCGGCCGCCATCGCGCGCTGCGTGCTAGCTGGCTTTGCTTCGGGTGAGCTGAGGCTGGCAGTGGGAGG
CGCTGGTGGTCGTTGGTGCTGTGGAGTGAAG