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Detailed information on CNT30664208


BLAST search results

BLAST vs Swiss-Prot:
sp|Q76H85|H4_SILLA, E-value = 2e-52

BLAST vs NONCODE:
NONGMAT000508, E-value = 4e-41

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30546681Triticum dicoccoidesIpomoea triloba48.1151.4983.06242forward
CNT30196946Triticum dicoccoidesPisum sativum27.8319.5581.43140forward
CNT30186872Triticum dicoccoidesSecale cereale62.2362.7397.12313forward
CNT30299936Triticum dicoccoidesTriticum aestivum83.176.5694.5418forward
CNT30394717Triticum dicoccoidesTriticum turgidum83.182.9494.5418forward
CNT30441099Triticum dicoccoidesAegilops tauschii62.2360.6697.12313forward
CNT30252143Triticum dicoccoidesAvena sativa58.8528.6396.28296forward
CNT3059678Triticum dicoccoidesArabidopsis lyrata31.4132.8584.18158forward
CNT3082467Triticum dicoccoidesBrassica juncea52.6836.9681.89265forward
CNT30449779Triticum dicoccoidesSaccharum spontaneum61.6336.7795.81310forward
CNT30331117Triticum dicoccoidesDioscorea rotundata60.4432.179.61304forward
CNT30147953Triticum dicoccoidesBrachypodium distachyon61.4335.5694.17309forward
CNT30101647Triticum dicoccoidesOryza rufipogon58.2531.4496.25293forward
CNT30496126Triticum dicoccoidesDigitaria exilis62.2346.0393.61313forward

Expression of CNT30664208

Peptides detected in this lncRNA

>peptide 1 (56 aa)
KFNDKLLQFQFHSILQKIANNSEMLRLQQRPRTLGTLIWWWWRPSPRNRRGCVPGA*

>peptide 2 (63 aa)
MSPEMRFTPPRRASLRIAGLVMPWMLSRRTFRWRLAPPLPSPLPPLPRPDIFSLLSLLLLGED*

Sequence

>CNT30664208
CAAAATTCAACGATAAACTGCTCCAATTTCAATTCCATTCGATCCTACAGAAGATAGCGAACAACAGCGAGATGCTGCGATTACAGCAACGACCACGAAC
CCTAGGCACTCTAATCTGGTGGTGGTGGCGGCCTAGCCCCCGAAACCGTAGAGGGTGCGTCCCTGGCGCTTGAGGGCGTAGACGACGTCCATGGCGGTGA
CGGTCTTGCGGCGGGCGTGCTCGGTGTAGGTGACGGCGTCGCGGATGACGTTCTCGAGGAAGATCTTGAGCACGCCGCGGGTCTCCTCGTAGATGAGCCC
CGAGATGCGCTTCACGCCGCCCCGACGCGCCAGCCTCCGGATCGCCGGCTTGGTGATGCCCTGGATGTTGTCGCGGAGGACCTTCCGGTGGCGCTTGGCG
CCGCCCTTGCCGAGCCCCTTGCCTCCCTTGCCGCGCCCCGACATCTTCTCGCTTCTCTCTCTTCTTCTCCTGGGTGAGGATTAGGCGGTGGAGGTGGTGG
CTG