Detailed information on CNT30664182


BLAST search results

BLAST vs Swiss-Prot:
sp|B3A0N2|NLTP_LYCBA, E-value = 3e-11

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30555577Triticum dicoccoidesOryza glaberrima39.4939.3588.99109forward
CNT30721578Triticum dicoccoidesTriticum spelta40.2236.63100111forward
CNT30148335Triticum dicoccoidesBrachypodium distachyon20.2914.6696.4356forward

Expression of CNT30664182

Peptides detected in this lncRNA

>peptide 1 (80 aa)
LGAIGSRADGVGDVDATLAGDAGDEVGLDAAHAARLLLEAGAVRNRTLRRRRCRRQHKRRHQQGQGRGGVGTASCHGRNS*

>peptide 2 (78 aa)
MLTPHLLGMLATRSGLMPPMPLACCLRQVQFATAPSAGAGAADSTSAATSRAKVAAAWARRAAMAEIASSVLALWVKAD

Sequence

>CNT30664182
CTTGGAGCAATCGGTTCTAGGGCTGATGGCGTAGGGGATGTTGACGCCACACTTGCTGGGGATGCTGGCGACGAGGTCGGGCTTGATGCCGCCCATGCCG
CTCGCCTGCTGCTTGAGGCAGGTGCAGTTCGCAACCGCACCCTCCGCCGGCGCCGGTGCCGCAGACAGCACAAGCGCCGCCACCAGCAGGGCCAAGGTCG
CGGCGGCGTGGGCACGGCGAGCTGCCATGGCAGAAATAGCTAGTAGTGTGCTTGCTCTGTGGGTGAAGGCCGATGG