« Back to Triticum dicoccoides search


Detailed information on CNT30664005


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30639585Triticum dicoccoidesNymphaea colorata20.938.7583.8793forward
CNT30223084Triticum dicoccoidesHordeum vulgare63.3736.1590.78282forward
CNT30439071Triticum dicoccoidesAegilops tauschii75.0610091.62334forward
CNT30255936Triticum dicoccoidesAvena sativa81.3598.3785.91362forward
CNT30261343Triticum dicoccoidesBrassica rapa23.8220.0485.85106forward
CNT307142Triticum dicoccoidesZea mays46.7416.6185.1208forward
CNT30684371Triticum dicoccoidesTriticum urartu82.4710087.47367forward
CNT30479625Triticum dicoccoidesArabidopsis halleri16.6322.3686.4974forward
CNT30570331Triticum dicoccoidesVitis vinifera24.7218.6483.64110forward
CNT30319836Triticum dicoccoidesAsparagus officinalis24.2713.5382.41108forward
CNT30104100Triticum dicoccoidesOryza rufipogon48.0939.1985.98214forward

Expression of CNT30664005

Peptides detected in this lncRNA

>peptide 1 (60 aa)
MFSLAAAASPSLQQRLLCRGHVLRPAAPRLEAGVLQRPRVGEGHVPWVRRLVHRVQVQRRL

Sequence

>CNT30664005
TGGCAAACGAAAGGCAACAATGCACTAGAAAAATCATGCGGATACAGCAGTAAAACCATTCCAAAGTAGTTTACTTAGGGTGGCAAAACACAGTATATAC
TCTCCGTCCATCTCTTCCATCAGAGCTGGTCTCGACCTGTAACAACGACGACACGCTGGCTGGCTAAGGTGCCCTCAAGCTGCTCAAGGCGCTACTAGCA
CTCTCCCTCCATAGATAGAATAGCTCGCCGACGGATCAGTAGCTGTAGTTCTTGACGAACATGTTCTCTTTGGCGGCCGCGGCCTCGCCGTCGCTGCAGC
AGCGCCTCCTGTGCCGCGGCCACGTTCTCCGGCCGGCCGCCCCACGTCTTGAGGCAGGTGTTCTGCAGCGCCCGCGCGTAGGAGAAGGACACGTGCCATG
GGTTCGGCGCCTGGTTCATCGCGTTCAGGTTCAGCGTCGCCTCCA