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Detailed information on CNT30663726


BLAST search results

BLAST vs Swiss-Prot:
sp|Q43206|CATA1_WHEAT, E-value = 0.0

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30692136Triticum dicoccoidesOryza sativa38.3325.994.01317forward
CNT30519927Triticum dicoccoidesSetaria italica38.3318.4787.07317forward
CNT30640148Triticum dicoccoidesNymphaea colorata38.0914.2785.71315forward
CNT30616919Triticum dicoccoidesSesamum indicum17.945.8282.43148forward
CNT30185318Triticum dicoccoidesSecale cereale53.0832.0783.37439forward
CNT30295853Triticum dicoccoidesTriticum aestivum41.4851.0499.13343forward
CNT30223144Triticum dicoccoidesHordeum vulgare25.6310098.58212forward
CNT30592095Triticum dicoccoidesMusa acuminata26.4874.2482.65219forward
CNT30552704Triticum dicoccoidesOryza glaberrima15.8445.1786.26131forward
CNT30260467Triticum dicoccoidesBrassica rapa10.7621.3486.5289forward
CNT302263Triticum dicoccoidesZea mays40.0229.6392.45331forward
CNT30369978Triticum dicoccoidesOryza glumipatula38.3342.2194.32317forward
CNT30575497Triticum dicoccoidesOryza barthii38.3325.2894.32317forward
CNT30116279Triticum dicoccoidesOryza nivara25.3910.5890210forward

Expression of CNT30663726

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MSSKRKVNMWSDSGWWEKKSRIRQFSWMWVLGLGLSACTMSGNFMPSRMKKTGKLLPTRSQLPSRV*

>peptide 2 (59 aa)
MIPGQKASCSFSEKKLSMLRFSTSRPTGCSGTTSSGHVLVTSSGSKSNRSSWSGSMVWM*

Sequence

>CNT30663726
GATGGGGTAGCGGGGCGCGTGCTTGGCGGGGTCGAACCTTGAGGGGAAGTAGTCGACCTCCTCGTCGCGGTGCATGAAGTTCATGAGCCCGTCGTAGTGG
TTGTTGTGGTGGGAGCACTTGGGCGCGTTGGCCGGCAGCAGCAGGTAGTTGGGCCCCAGCCGGTGGCGCTGCGTGTCGGAGTAGGAGAAGATCCTCGTCT
GCAGCAGCTTGTCGTCCGAGTAGTACACCCCGGGGACGATGATCCCGGGGCAGAAGGCCAGCTGCTCGTTCTCCGAGAAGAAGTTGTCGATGTTGCGGTT
CAGCACCAGCCGCCCCACGGGCTGCAGCGGCACCACGTCCTCGGGCCACGTCTTGGTCACGTCCAGCGGGTCGAAGTCGAACCGCTCCTCGTGGTCCGGG
TCGATGGTCTGGATGTAGAAGGTCCACTCCGGGTAGTTGCCGGCGGCGATGGAGTCGGTGAGGTCCTTGGTGGCGTGGCTGTGGTTGGTGTTGACGCCGG
AGCCGTCCATGTGGCGGTAGTCGGCGGGCACGCCGATGTCGTCGAAGAGGAAGGTGAACATGTGGAGCGACTCCGGGTGGTGGGAGAAGAAGTCGAGGAT
CCGCCAGTTCTCCTGGATGTGGGTCTTGGGGTTGGGCTTGAGCGCGTGCACCATGTCCGGGAACTTCATGCCGTCGCGGATGAAGAAGACGGGGAAGTTG
TTGCCCACCAGGTCCCAGTTGCCCTCCCGGGTGTAGAACTTGATGGCGAAGCCGCGCGGGTCGCGGAGCGTCTCGGGGGAGCCGCGCTCGTGGATCACGG
TGGTAGTCCTCCAGCAGGATCGGACCT