Detailed information on CNT3066368


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 9e-157

BLAST vs NONCODE:
NONMEST001181, E-value = 3e-80

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30541358Selaginella moellendorffiiBrassica napus73.3350.5884.63657forward
CNT3079390Selaginella moellendorffiiBrassica juncea73.3356.4484.63657forward
CNT30608632Selaginella moellendorffiiGossypium raimondii76.3463.9383.04684forward
CNT3031515Selaginella moellendorffiiTheobroma cacao76.3473.7182.75684forward

Expression of CNT3066368

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MVLPVRVFTKICIPPRSLRTRWRVDSFWML*

>peptide 2 (33 aa)
MVSELSTSRVIVLPVRVFTKICIVAAEISLQSQK

>peptide 3 (52 aa)
MRRCWSGGMPSLSWILVLTLSIVSELSTSRVIVLPVKVLTKICMPPRSRKTR*

>peptide 4 (88 aa)
MEGRLFLDVIICQSTPILELLPGKDETLLVRRNAFLVLDLGLDIVDRVRALHLQSDRLACQGLDEDLHASTEPQNKMKRRFLLDVVVG*

>peptide 5 (59 aa)
MRESGEVFIRMEERLFEMTWERVFRLGHHGDEGRDGGSTLSGCYNLPEYAHPRAASRQR*

Sequence

>CNT3066368
CATAATTTAAGCAAACAAAGCGTTACGCAGCAAATTATTAACTAGGTAATAATGCTAGATACAAATTGACGGGTGAAGATCATTATAAATCAAACAGATG
AGAGAAAGCGGTGAGGTTTTTATTAGAATGGAAGAGAGGTTATTTGAAATGACATGGGAGAGAGTGTTTAGGCTTGGCCACCACGGAGACGAAGGACGAG
ATGGAGGGTCGACTCTTTCTGGATGTTATAATCTGCCAGAGTACGCCCATCCTCGAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGAATG
CCTTCCTTGTCCTGGATCTTGGTCTTGACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATCT
GCATGCCTCCACGGAGCCGCAAAACAAGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCTAATGTGCGTCCATCCTCGAGTTGCTTCCCAGCGAA
AATAAGTCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACCTCCAGAGTGATGGTC
TTGCCGGTGAGGGTCTTCACGAAGATTTGCATCCCGCCGCGCAGCCTCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCTAAGGTCC
TGCCGTCCTCTAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATCCCTTCTTTGTCCTGAATCTTCGTCTTAACATTGTCGATGGTGTC
CGAGCTCTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCGTTGCTGCCGAAATAAGCCTACAGTCGCAAAAAGC