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Detailed information on CNT3066364


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 2e-100

BLAST vs NONCODE:
NONTPRT002153, E-value = 1e-63

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30608663Selaginella moellendorffiiGossypium raimondii60.1658.8484.87456forward

Expression of CNT3066364

Peptides detected in this lncRNA

>peptide 1 (36 aa)
MVSELSTSRVIVLPVRVFTKICIVAAEISLQSQKAP*

>peptide 2 (59 aa)
MRESGEVFIRMEERLFEMTWERVFRLGHHGDEGRDGGSTLSGCYNLPEYAHPRAASRQR*

>peptide 3 (52 aa)
MRRCWSGGMPSLSWILVLTLSIVSELSTSRVIVLPVKVLTKICMPPRSRKTR*

>peptide 4 (88 aa)
MEGRLFLDVIICQSTPILELLPGKDETLLVRRNAFLVLDLGLDIVDRVRALHLQSDRLACQGLDEDLHASTEPQNKMKRRFLLDVVVG*

Sequence

>CNT3066364
TTATTAACTAGGTAATAATGCTAGATACAAATTGACGGGTGAAGATCATTATAAATCAAACAGATGAGAGAAAGCGGTGAGGTTTTTATTAGAATGGAAG
AGAGGTTATTTGAAATGACATGGGAGAGAGTGTTTAGGCTTGGCCACCACGGAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGGATGTTATAATCT
GCCAGAGTACGCCCATCCTCGAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGTCTTGACATTGT
CGATCGTGTCCGAGCTCTCCACCTCCAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATGCCTCCACGGAGCCGCAAAACAAGATGAAG
CGTCGATTCCTTCTGGATGTTGTAGTCGGCTAATGTCCTGCCGTCCTCTAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATCCCTTCT
TTGTCCTGAATCTTCGTCTTAACATTGTCGATGGTGTCCGAGCTCTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCG
TTGCTGCCGAAATAAGCCTACAGTCGCAAAAAGCCCCGTGAGAAACGTAGAAATCGAAAGAAAAGATCAGATCCAGCAAGACAATCACGAAACCCTCGCA
CACCGACCGGAAATTTCTAGCAGGAAATCATCACCGCCATAGCCATAGCCACTCACCA