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Detailed information on CNT3066362


BLAST search results

BLAST vs Swiss-Prot:
sp|P69309|UBIQP_AVEFA, E-value = 0.0

BLAST vs NONCODE:
NONMEST001181, E-value = 7e-106

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30528288Selaginella moellendorffiiEucalyptus grandis92.4968.0685.31912forward
CNT30727322Selaginella moellendorffiiCorchorus capsularis92.4971.7582.68912forward
CNT30169912Selaginella moellendorffiiPistacia vera92.3957.383.97911forward
CNT30238962Selaginella moellendorffiiBrassica oleracea92.4947.1883.22912forward
CNT30312526Selaginella moellendorffiiCamelina sativa92.3984.5183.1911forward
CNT3073617Selaginella moellendorffiiBrassica juncea89.4526.1183.11882forward
CNT30262381Selaginella moellendorffiiBrassica rapa92.656.9983.13913forward
CNT30460578Selaginella moellendorffiiSaccharum spontaneum92.645.6383.02913forward
CNT30608664Selaginella moellendorffiiGossypium raimondii92.4982.0982.24912forward
CNT30228911Selaginella moellendorffiiAnanas comosus92.658.6484.99913forward
CNT30364985Selaginella moellendorffiiSorghum bicolor90.4786.9483.63892forward
CNT3031526Selaginella moellendorffiiTheobroma cacao92.4984.2182.79912forward
CNT30120658Selaginella moellendorffiiCitrus clementina92.3990.5682.55911forward

Expression of CNT3066362

Peptides detected in this lncRNA

>peptide 1 (49 aa)
MEERLFEMTWERVFRLGHHGDEGRDGGSTLSGCYNLPEYAHPRAASRQR*

>peptide 2 (40 aa)
MVSELSTSRVIVFPVSVLTKICIPPRRRSTRWRVDSFWML*

>peptide 3 (88 aa)
MEGRLFLDVIICQSTPILELLPGKDETLLVRRNAFLVLDLGLDIVDRVRALHLQSDRLACQGLDEDLHASTEPQNKMKRRFLLDVVVG*

>peptide 4 (52 aa)
MRRCWSGGMPSLSWILVLTLSIVSELSTSRVIVLPVKVLTKICMPPRSRKTR*

>peptide 5 (29 aa)
MVSELSTSRVIVLPVRVFTKICIVAAEISL

>peptide 6 (30 aa)
MVLPVRVFTKICIPPRSLRTRWRVDSFWML*

Sequence

>CNT3066362
AATGGAAGAGAGGTTATTTGAAATGACATGGGAGAGAGTGTTTAGGCTTGGCCACCACGGAGACGAAGGACGAGATGGAGGGTCGACTCTTTCTGGATGT
TATAATCTGCCAGAGTACGCCCATCCTCGAGCTGCTTCCCGGCAAAGATGAGACGCTGCTGGTCCGGAGGAATGCCTTCCTTGTCCTGGATCTTGGTCTT
GACATTGTCGATCGTGTCCGAGCTCTCCACCTCCAGAGTGATCGTCTTGCCTGTCAAGGTCTTGACGAAGATCTGCATGCCTCCACGGAGCCGCAAAACA
AGATGAAGCGTCGATTCCTTCTGGATGTTGTAGTCGGCTAATGTCCTGCCATCCTCGAGCTGCTTCCCGGCGAAGATAAGTCGCTGCTGGTCCGGTGGAA
TCCCCTCCTTGTCCTGGATCTTAGTCTTCACGTTGTCGATGGTGTCTGAGCTCTCCACCTCCAGAGTGATCGTCTTCCCTGTGAGTGTCTTGACAAAGAT
CTGCATCCCTCCACGAAGACGAAGCACAAGGTGGAGGGTCGACTCCTTCTGGATGTTATAGTCCGCCAAGGTGCGTCCATCCTCGAGTTGCTTCCCAGCG
AAAATAAGTCGCTGCTGGTCCGGAGGAATTCCTTCCTTGTCCTGGATCTTCGTCTTGACGTTGTCAATAGTGTCCGAGCTCTCCACCTCCAGAGTGATGG
TCTTGCCGGTGAGGGTCTTCACGAAGATTTGCATCCCGCCGCGCAGCCTCAGGACGAGATGGAGGGTCGACTCCTTCTGGATGTTGTAGTCCGCTAAGGT
CCTGCCGTCCTCTAGCTGCTTACCAGCGAAGATGAGACGCTGCTGGTCCGGAGGAATCCCTTCTTTGTCCTGAATCTTCGTCTTAACATTGTCGATGGTG
TCCGAGCTCTCCACCTCGAGGGTGATCGTCTTGCCGGTGAGGGTTTTCACAAAGATCTGCATCGTTGCTGCCGAAATAAGCCTACA