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Detailed information on CNT30663481


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697771Triticum dicoccoidesOryza sativa28.5746.7386.67150forward
CNT30296412Triticum dicoccoidesTriticum aestivum84.9599.5599.78446forward
CNT30104515Triticum dicoccoidesOryza rufipogon28.5730.3686150forward
CNT30118046Triticum dicoccoidesOryza nivara28.5738.3686.67150forward

Expression of CNT30663481

Peptides detected in this lncRNA

>peptide 1 (53 aa)
MFFKSQLSSFPLEASHMPASVQDPSEAYPSRPSEVDPPYQAEQARREGAIERTC

>peptide 2 (64 aa)
SVTYNIQAVFMFTGGNTNTEECTPKMSSLFITQAIQMVPVFHLSFFSRNLISSSSYPIIIYSNQ*

Sequence

>CNT30663481
ACAGTGTAACATATAACATACAGGCAGTGTTTATGTTCACGGGTGGCAACACCAACACGGAGGAGTGTACACCCAAAATGTCTAGTCTTTTTATCACACA
AGCTATACAAATGGTACCAGTCTTCCACCTCTCATTCTTCAGCCGGAACCTAATCTCATCCTCATCCTACCCGATCATAATATATAGCAACCAGTAAATT
TACTCTACCTCGGCTAGAGATATTGCTCGCCAAAATTGCCCTGGTACCAAAAGAATATTAACTGAAACAACCAATAGCCCAAATCAATCTACAACTTGAA
AGATACCTTTGGGATCCTCATGCTCCCTCTGTAAAAAAAGACTGAAACAATCGACATCATCTATGTTCTTCAAAAGCCAACTCAGTAGTTTCCCATTGGA
GGCATCCCATATGCCGGCATCGGTCCAGGACCCATCGGAGGCATACCCATCCCGCCCATCGGAGGTGGACCCCCCATACCAGGCGGAGCAGGCAAGGCGA
GAGGGAGCAATTGAGCGTACATGTT