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Detailed information on CNT30663140


BLAST search results

BLAST vs Swiss-Prot:
sp|Q0IQF7|RS16_ORYSJ, E-value = 1e-75

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696918Triticum dicoccoidesOryza sativa46.8164.7387.62323forward
CNT30515426Triticum dicoccoidesJuglans regia29.8615.6882.52206forward
CNT30295032Triticum dicoccoidesTriticum aestivum37.8350100261forward
CNT30391876Triticum dicoccoidesTriticum turgidum32.4610095.09224forward
CNT30562499Triticum dicoccoidesActinidia chinensis12.0337.3985.5483forward
CNT3083687Triticum dicoccoidesVigna radiata29.7121.5682.44205forward
CNT30555554Triticum dicoccoidesOryza glaberrima50.7242.8488350forward
CNT30438780Triticum dicoccoidesAegilops tauschii83.0471.3690.05573forward
CNT30247768Triticum dicoccoidesAvena sativa61.0169.2492.16421forward
CNT30472632Triticum dicoccoidesSaccharum spontaneum50.727.1687.43350forward
CNT30136796Triticum dicoccoidesLolium perenne3030.3191.3207forward
CNT30721366Triticum dicoccoidesTriticum spelta53.0471.2193.99366forward
CNT30365247Triticum dicoccoidesSorghum bicolor25.0725.4888.44173forward
CNT30151249Triticum dicoccoidesBrachypodium distachyon38.8451.4490.3268forward
CNT30104226Triticum dicoccoidesOryza rufipogon37.2553.7788.33257forward
CNT30581659Triticum dicoccoidesEchinochloa crusgalli27.129.0487.17187forward
CNT30117820Triticum dicoccoidesOryza nivara50.7244.8788350forward
CNT30176592Triticum dicoccoidesVigna angularis29.7125.1584.39205forward

Expression of CNT30663140

Peptides detected in this lncRNA

>peptide 1 (58 aa)
MSMSLKRDLPARRIGSKAFRRSISGRMSSMGAPLTLMRPRRRRSSSGRSTGRCPASGG*

>peptide 2 (33 aa)
DSKTPSSTRQDTADNSQFLEIISNSLVQKKTNY*

Sequence

>CNT30663140
GATAGCAAAACCCCTTCGTCAACTAGGCAGGATACTGCAGACAACTCACAGTTCTTAGAGATCATATCCAATTCATTGGTTCAAAAGAAAACAAACTACT
AGCGGTAAAAGGTAGATAGATAGGCAGGCAAGGAGTAGGCCACCGCCGCCATACCCAACAAGAGATCTCGCCGGAGCTCAACGGTACGACTTCTGGAAAC
GCGCGCGGGCACCGCGACCGCCAAACTTCTTGGGCTCGCAGCGGCGCGGGTCGGCGACGAGGAGCGTCCGGTCGTAGCGGCCGAAGATCTCCTTCACCTC
CTTCTTGGCCGCCTCGTCGACGTACTTCTGGTAGTAGGCGACGAGAGACTTCGCGATGGCCTGGCGGATGGAGTAGATCTGGCTCGTCTTCCCTCCGCCG
CGGACGCGGATACGCATGTCGATGTCCTTGAAGCGGGACCTGCCGGCGAGAAGGATCGGCTCGAAGGCCTTCAGGCGGAGCATCTCGGGGCGGATGAGCT
CGATGGGGGCGCCGTTGACCTTGATGAGGCCACGGCGACGGCGGTCTTCTTCCGGCCGAAGCACTGGACGGTGCCCGGCGTCGGGCGGGTGAGAACGGCT
GCCATGGTGGCTGCGGCGGTGTGCTTGGTTGCTGTGAGCGCGGCGGCGCAGGTTAGGGTTTTTGGTGGCGGCGCGTAGAGGGGATCACGG