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Detailed information on CNT30662767


BLAST search results

BLAST vs Swiss-Prot:
sp|P49036|SUS2_MAIZE, E-value = 1e-33

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30677855Triticum dicoccoidesSetaria viridis87.9835.7487.98183forward
CNT30522214Triticum dicoccoidesSetaria italica41.3510.9893.0286forward
CNT30305412Triticum dicoccoidesTriticum aestivum32.6922.992.6568forward
CNT30588421Triticum dicoccoidesMusa acuminata58.1742.9185.95121forward
CNT30445673Triticum dicoccoidesSaccharum spontaneum54.3342.3290.27113forward
CNT3015514Triticum dicoccoidesZea mays39.4216.8493.982forward
CNT3067157Triticum dicoccoidesLeersia perrieri68.7530.8991.61143forward
CNT30361636Triticum dicoccoidesSorghum bicolor44.232592.3992forward

Expression of CNT30662767

Peptides detected in this lncRNA

>peptide 1 (33 aa)
WRWGDHLLAESPSTANGTVLAMVRYLRAYNISR*

Sequence

>CNT30662767
CATGGAGGTGGGGAGATCACTTGCTCGCGGAGTCTCCCTCAACAGCTAACGGAACAGTGCTGGCCATGGTGCGGTACTTGAGGGCGTACAACATCTCGAG
GTAGCGGCGGATCTCGCGCCTCTCGAGGTTGGAGACGTACTTCCAGAACCCATACACGCCGGTGAGGGTCATCAGCCTCTCAGAGTAAAGCTTCCAGGTG
TATCTGAA