Detailed information on CNT30662759


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT3067608Triticum dicoccoidesLeersia perrieri101.6510083.12308forward
CNT30689288Triticum dicoccoidesTriticum urartu99.6796.7995.36302reverse complement
CNT30368744Triticum dicoccoidesSorghum bicolor84.8270.9990.66257forward
CNT30369610Triticum dicoccoidesOryza glumipatula101.3274.8884.36307reverse complement
CNT30105324Triticum dicoccoidesOryza longistaminata95.3890.685.12289reverse complement
CNT30148640Triticum dicoccoidesBrachypodium distachyon99.6799.0292.05302forward
CNT30102085Triticum dicoccoidesOryza rufipogon100.6655.4585.25305forward
CNT30116196Triticum dicoccoidesOryza nivara101.3258.5985.67307forward

Expression of CNT30662759

Peptides detected in this lncRNA

>peptide 1 (39 aa)
MWQAQREAGFTEQRQLPASNGGRITGRCTPWPLGPCSLL*

Sequence

>CNT30662759
GCCGAGCTCAGTTGCGAGAGCTTGTAACCCGAGTGGGGGCATTAAGGTGATGTGGACGTTGTCGTAGCGCTGCGGGCCTGGTTTGAGAGTGCTATTGTTG
GCCCGCCCGTTCCAAGTTGCGTAGTGGACAGCTGGGGCCTATGCGAAAGCTGGGCCTCACGGTCCATAATGTGGCAGGCACAGCGTGAGGCTGGCTTCAC
AGAGCAGCGACAACTGCCCGCTTCCAACGGTGGAAGGATAACGGGCCGCTGCACTCCTTGGCCGCTTGGGCCTTGCAGCCTACTCTAGCGAACCATCACT
TTT