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Detailed information on CNT30662749


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697318Triticum dicoccoidesOryza sativa40.4334.7892.86112forward
CNT30676942Triticum dicoccoidesSetaria viridis40.432395.54112forward
CNT30524376Triticum dicoccoidesSetaria italica40.4318.7995.54112forward
CNT30297243Triticum dicoccoidesTriticum aestivum101.4494.395.02281forward
CNT30555270Triticum dicoccoidesOryza glaberrima39.3523.5494.5109forward
CNT30439786Triticum dicoccoidesAegilops tauschii101.4479.8395.02281forward
CNT304300Triticum dicoccoidesZea mays40.4317.3692.86112forward
CNT30117872Triticum dicoccoidesOryza nivara39.3533.9695.41109forward

Expression of CNT30662749

Peptides detected in this lncRNA

>peptide 1 (91 aa)
NQNGHVSSALDNLHVRHIRTLKLFPVKFTQHMLLHRAHAADHQQPTAADGQSTASSQAGHPLGGAGDDGEQVNGDAVAEVVEGVAVKEQGAG

Sequence

>CNT30662749
AAATCAGAACGGTCATGTTTCTTCTGCCCTTGATAATTTACACGTACGGCACATTCGTACTCTCAAACTTTTCCCGGTAAAATTCACACAGCACATGCTG
CTGCATCGCGCGCACGCAGCTGATCATCAGCAACCGACGGCGGCGGACGGGCAATCAACGGCCAGCTCACAGGCTGGGCACCCTCTCGGCGGCGCCGGAG
ATGACGGTGAGCAGGTTAATGGGGATGCTGTTGCCGAAGTAGTTGAGGGTGTTGCCGTCAAGGAGCAGGGCGCCGGT