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Detailed information on CNT30662744


BLAST search results

BLAST vs Swiss-Prot:
sp|Q40677|ALFP_ORYSJ, E-value = 9e-53

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697243Triticum dicoccoidesOryza sativa31.2712.9889.82167forward
CNT30677406Triticum dicoccoidesSetaria viridis38.235.9288.24204forward
CNT30524157Triticum dicoccoidesSetaria italica50.1921.9991.04268forward
CNT30314796Triticum dicoccoidesCorylus avellana32.425.1882.66173forward
CNT30381342Triticum dicoccoidesManihot esculenta24.5316.2181.68131forward
CNT30708916Triticum dicoccoidesGlycine max17.0437.7684.6291forward
CNT30390900Triticum dicoccoidesTriticum turgidum81.8463.1595.42437forward
CNT30237226Triticum dicoccoidesBrassica oleracea24.1628.4886.05129forward
CNT30462400Triticum dicoccoidesSaccharum spontaneum52.0620.4385.97278forward
CNT30136123Triticum dicoccoidesLolium perenne24.1623.893.8129forward
CNT3017013Triticum dicoccoidesZea mays30.926.2788.48165forward
CNT30217689Triticum dicoccoidesKalanchoe fedtschenkoi18.543391.9299forward
CNT3068263Triticum dicoccoidesLeersia perrieri28.8420.2491.56154forward
CNT30338292Triticum dicoccoidesEragrostis tef50.1983.7588.06268forward
CNT30367530Triticum dicoccoidesSorghum bicolor33.3352.3590.45178forward
CNT30371242Triticum dicoccoidesOryza glumipatula31.2725.589.82167forward
CNT30481517Triticum dicoccoidesChara braunii20.9737.0986.61112forward
CNT30570222Triticum dicoccoidesVitis vinifera41.0143.8979.91219forward
CNT30150970Triticum dicoccoidesBrachypodium distachyon32.7772.6190.29175forward
CNT30104026Triticum dicoccoidesOryza rufipogon45.6927.6390.16244forward
CNT30578122Triticum dicoccoidesOryza barthii22.114.9789.83118forward
CNT30582099Triticum dicoccoidesEchinochloa crusgalli29.9629.6890160forward
CNT30595262Triticum dicoccoidesEragrostis curvula45.6933.890.16244forward
CNT30604735Triticum dicoccoidesOryza punctata24.5315.5488.55131forward
CNT30557232Triticum dicoccoidesPanicum hallii44.3835.6491.14237forward

Expression of CNT30662744

Peptides detected in this lncRNA

>peptide 1 (56 aa)
GALQIVHTYGSKQRQQCSRKNHANTTVGPFQSSLLRVAKHSIYSLSISSIRAGLDL*

>peptide 2 (54 aa)
MFSLASAASPSLVYLPSCARELALARSSSASCAAATFSGRPPHVLRQVFCSARA*

Sequence

>CNT30662744
GGGGGCGCTTCAGATTGTTCATACTTACGGTAGCAAACAAAGGCAACAATGCTCTAGAAAAAACCATGCGAATACAACAGTAGGACCATTCCAAAGTAGT
TTACTTAGGGTGGCAAAACACAGTATATACTCTCTGTCCATCTCTTCCATCAGAGCTGGTCTCGACCTGTAACAACGACGACCCACTGGCTGGCTAAGGC
GCTACTGGCTGACAGTGATGCGGTAGATTATTAGATAGACAGCTCGCCGACGGATCAGTAGCTGTAGTTCTTGACGAACATGTTCTCGCTGGCTTCCGCG
GCCTCGCCGTCGCTGGTGTACTTGCCGAGCTGCGCCAGGGAGTTGGCCTTGGCGCGCAGCAGCAGCGCCTCCTGCGCCGCGGCCACGTTCTCCGGCCGCC
CGCCCCACGTCTTGAGGCAGGTGTTCTGCAGCGCCCGCGCGTAGGAGAAGGACACGTGCCACGGGTTCGGCGCCTGGTTCATCGCGTTGAGGTTCAGCGT
TGCCTCAACCTCCGACTGACCGCCAGACAAGAAC