« Back to Triticum dicoccoides search


Detailed information on CNT30662523


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30696855Triticum dicoccoidesOryza sativa12.7723.9990.3683forward
CNT30295260Triticum dicoccoidesTriticum aestivum85.8578.2699.28558forward
CNT30683568Triticum dicoccoidesTriticum urartu52.3169.2599.71340forward
CNT30104073Triticum dicoccoidesOryza rufipogon27.8522.4384.53181forward

Expression of CNT30662523

Peptides detected in this lncRNA

>peptide 1 (65 aa)
MRCESHCKKQQPHLLSTRKLARRENHAQASTRPGPRPSLSHLWNTRNVGTRTAGGEAGHRTSTAT*

Sequence

>CNT30662523
CATGAGGTGTGAGAGCCACTGCAAGAAACAGCAACCCCACTTATTAAGCACGCGGAAGCTAGCACGCAGAGAAAATCACGCACAGGCGAGCACGAGACCA
GGCCCACGTCCCAGCCTCTCTCACTTATGGAACACACGTAACGTAGGCACACGCACGGCCGGCGGCGAGGCCGGCCACCGCACGTCGACGGCGACCTAGC
CGAAGTGGTGGTGCTTCTTCTCGCCGCTGGCCTCCTTGGCCTCCTTGTGGTCCTGCTTCTTCTCGTGGTGCTCGTGGAAGACGAAGCCGCCGGCGCCGAC
GGCTGCGGCGGCAGCCACCTCCTCCTCGATCTTGTGCTTGTGCGCGTGCTCCTTGTGCTTGTGGTGCTTCTCCTCCTTGGTGATCCGCTCGTACTCGCCG
TCGTTGCCGGTGGCGGTCACCACCGTCTCGGTCGAGTACCCGTACGTGTCGACGCCGCCGTCAGCGGCGGGCTGGAAGTCCTCGCCCTCCTTCTTGTGGT
GGAACAGGTGGTGGTGCTTCTCCTCCGACATGGCTGGCTGATCGATTAGCTAGCTAGCACTTGTGTGTGTGTGTGTATGTGACAGTAGGACAGCTGCTTA
TCTGCTTGGTTTGTGTAGGCTTCCGGGTGGCCCGGGTTTTATAGGCTGAG