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Detailed information on CNT30662162


BLAST search results

BLAST vs Swiss-Prot:
sp|Q8VZC0|UXS1_ARATH, E-value = 1e-06

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30595456Triticum dicoccoidesOryza meridionalis20.5412.1194.269forward

Expression of CNT30662162

Peptides detected in this lncRNA

>peptide 1 (54 aa)
STRWLPTKPAPPVTTTRRGGGRKPAGTPRESDEWPVKEKMGLRSVGLEADREKR*

>peptide 2 (49 aa)
VDEVAAHEARPAGDDDAARRRAEARGDAAGVRRVAGEGEDGASLGGVGG*

Sequence

>CNT30662162
GTCGACGAGGTGGCTGCCCACGAAGCCCGCCCCGCCGGTGACGACGACGCGGCGAGGCGGCGGGCGGAAGCCCGCGGGGACGCCGCGGGAGTCCGACGAG
TGGCCGGTGAAGGAGAAGATGGGGCTTCGCTCGGTGGGGTTGGAGGCTGACAGGGAGAAGAGGTAGGGGCGGAGGAGGAAGAAGGAGGAGGCGCTGCTCG
CGGAGGAGGTAGCCGACCCAGGTGCGCGGCCCGGGGCGCGCGGGCTTGGAGATCTTGGACGCCGGCGCGTGCGCCGGCGACGGCGCGTGGGTGGGGGACT
TGTGGAGCTGCTTCATGGCGGGAGAGCGGCGGGGAG