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Detailed information on CNT30662078


BLAST search results

BLAST vs Swiss-Prot:
sp|P23993|PSAL_HORVU, E-value = 3e-58

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30673472Triticum dicoccoidesSetaria viridis64.4860.9188.77187forward
CNT30520920Triticum dicoccoidesSetaria italica80.3433.6288.41233forward
CNT30629841Triticum dicoccoidesVigna unguiculata25.1712.4886.373forward
CNT30182270Triticum dicoccoidesSecale cereale20.3410.6996.6159forward
CNT30292897Triticum dicoccoidesTriticum aestivum66.2132.696.88192forward
CNT30222490Triticum dicoccoidesHordeum vulgare66.5541.0687.05193forward
CNT30390478Triticum dicoccoidesTriticum turgidum79.6619.3896.97231forward
CNT30555733Triticum dicoccoidesOryza glaberrima6012.2490.23174forward
CNT30438727Triticum dicoccoidesAegilops tauschii10091.7791.72290forward
CNT30249784Triticum dicoccoidesAvena sativa63.4522.4192.39184forward
CNT30135064Triticum dicoccoidesLolium perenne43.121.8987.2125forward
CNT3014188Triticum dicoccoidesZea mays63.4524.0888.04184forward
CNT30683149Triticum dicoccoidesTriticum urartu48.6231.8396.45141forward
CNT30720963Triticum dicoccoidesTriticum spelta58.6230.5297.06170forward
CNT30344811Triticum dicoccoidesEragrostis tef64.1433.2790.86186forward
CNT30597198Triticum dicoccoidesOryza meridionalis22.764.9396.9766forward
CNT30319122Triticum dicoccoidesAsparagus officinalis203.9289.6658forward
CNT30582414Triticum dicoccoidesEchinochloa crusgalli68.2833.4588.38198forward
CNT30604850Triticum dicoccoidesOryza punctata32.419.6886.1794forward
CNT30556995Triticum dicoccoidesPanicum hallii80.3433.1488.84233forward
CNT30551896Triticum dicoccoidesOryza brachyantha67.2429.4190.26195forward

Expression of CNT30662078

Peptides detected in this lncRNA

>peptide 1 (41 aa)
VSVRAGAVEGAPSLKEATPYMVRQTLRMETRPMAPRVPAWP*

>peptide 2 (28 aa)
MPRRSGLTAVTGVSRLPMNGSPLMGWTTW

>peptide 3 (95 aa)
GEREGGRGGGRALVEGGDTVHGEADAKDGDEADGAESACLAVNWRVAERAGEREGADEEVAMGEADLDAAEERADGGDGRLQAADEWVAVDGLDHL

Sequence

>CNT30662078
CGGTGAGCGTGAGGGCGGGCGCGGTGGAGGGCGCGCCCTCGTTGAAGGAGGCGACACCGTACATGGTGAGGCAGACGCTAAGGATGGAGACGAGGCCGAT
GGCGCCGAGAGTGCCTGCCTGGCCGTGAATTGGCGTGTTGCGGAGCGGGCCGGTGAGCGCGAAGGGGCCGACGAGGAGGTAGCCATGGGCGAGGCCGACC
TCGATGCCGCGGAGGAGCGGGCTGACGGCGGTGACGGGCGTCTCCAGGCTGCCGATGAATGGGTCGCCGTTGATGGGCTGGACCACCTGG