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Detailed information on CNT30662061


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30697843Triticum dicoccoidesOryza sativa61.6537.7699.321183forward
CNT30670953Triticum dicoccoidesSetaria viridis17.5136.499.7336forward
CNT30524653Triticum dicoccoidesSetaria italica26.6342.6599.8511reverse complement
CNT30548882Triticum dicoccoidesIpomoea triloba51.6937.6398.59992reverse complement
CNT30378671Triticum dicoccoidesArabidopsis thaliana7.8753.5597.35151forward
CNT30632593Triticum dicoccoidesVigna unguiculata52.0159.1297.6998reverse complement
CNT30504983Triticum dicoccoidesNicotiana attenuata19.8520.9298.95381reverse complement
CNT30635645Triticum dicoccoidesCapsicum annuum21.4766.5692.48412reverse complement
CNT3098505Triticum dicoccoidesSolanum tuberosum23.1445.2695.27444forward
CNT30304298Triticum dicoccoidesTriticum aestivum10072.5299.371919forward
CNT30221494Triticum dicoccoidesHordeum vulgare39.9261.6799.35766reverse complement
CNT30400948Triticum dicoccoidesTriticum turgidum10076.7699.581919forward
CNT30569653Triticum dicoccoidesActinidia chinensis16.4747.0996.84316forward
CNT30585815Triticum dicoccoidesMusa acuminata52.2741.3395.811003reverse complement
CNT30234810Triticum dicoccoidesBrassica oleracea29.3974.594.33564forward
CNT30554921Triticum dicoccoidesOryza glaberrima7.1939.0997.83138reverse complement
CNT30147394Triticum dicoccoidesMedicago truncatula51.95098.19996reverse complement
CNT30440683Triticum dicoccoidesAegilops tauschii50.3410099.48966reverse complement
CNT30248040Triticum dicoccoidesAvena sativa40.6557.9598.72780forward
CNT3081478Triticum dicoccoidesBrassica juncea38.7264.1694.89743reverse complement
CNT30143344Triticum dicoccoidesLolium perenne101.1586.7797.371941forward
CNT3016633Triticum dicoccoidesZea mays98.4998.996.461890forward
CNT30229838Triticum dicoccoidesAnanas comosus23.0810098.19443forward
CNT30218527Triticum dicoccoidesKalanchoe fedtschenkoi39.0350.399.07749forward
CNT3067373Triticum dicoccoidesLeersia perrieri14.5992.7299.64280reverse complement
CNT30655299Triticum dicoccoidesRosa chinensis51.6434.9298.59991reverse complement
CNT30203595Triticum dicoccoidesHelianthus annuus52.2754.7596.811003reverse complement
CNT30689128Triticum dicoccoidesTriticum urartu68.4770.6898.861314reverse complement
CNT30721611Triticum dicoccoidesTriticum spelta12.4551.8499.58239forward
CNT30366518Triticum dicoccoidesSorghum bicolor16.2696.393.27312forward
CNT30595506Triticum dicoccoidesOryza meridionalis17.9831.36100345forward
CNT30360998Triticum dicoccoidesLactuca sativa15.1110098.62290reverse complement
CNT30369805Triticum dicoccoidesOryza glumipatula50.2367.2297.1964reverse complement
CNT30154718Triticum dicoccoidesPrunus persica24.768.493.46474reverse complement
CNT30420891Triticum dicoccoidesPapaver somniferum30.7521.9792.37590forward
CNT30323793Triticum dicoccoidesAsparagus officinalis10.7965.5197.58207reverse complement
CNT30151602Triticum dicoccoidesBrachypodium distachyon19.0773.0594.81366forward
CNT30104648Triticum dicoccoidesOryza rufipogon24.3980.2798.5468forward
CNT30575706Triticum dicoccoidesOryza barthii50.0839.4397.29961reverse complement
CNT30582488Triticum dicoccoidesEchinochloa crusgalli61.5497.2899.661181reverse complement
CNT30495774Triticum dicoccoidesDigitaria exilis20.4899.2499.49393forward
CNT30116696Triticum dicoccoidesOryza nivara61.6529.8499.411183forward
CNT3040451Triticum dicoccoidesMarchantia polymorpha9.4330.8392.82181reverse complement

Expression of CNT30662061

Peptides detected in this lncRNA

>peptide 1 (66 aa)
MLHRLCRPPSIPLSFGLATVLPRRSVSRVSWAPDPRRPRANTHRLRHGLPGYLILFAPHAFAPQRR*

>peptide 2 (51 aa)
LRLPCYDFTPVEDPTVVCANKTTKGLCGTSGTQKSWVIIGPMLRAKPIPRV*

>peptide 3 (87 aa)
MLSHPSVGRDPESCLRFWRSFVDLRISPLHTKFHSPLSHSSELVSRAFRHFLATFTFNPIHRLRALYAQSFRRTLAPPVLPRLLARS*

>peptide 4 (44 aa)
MVKFLLKAQLRAGTQSSSSAGTSLGGNFSLGACLSNTKRGFRSL*

>peptide 5 (37 aa)
MGDHWSDASGETNSQGVTGGVYRARVHIHRGMLIRDY*

>peptide 6 (50 aa)
MIAHSTKELYKRHCPSSLTRYCWIGLSPIVQDSPLLPPVGVRAVSQSQCG*

>peptide 7 (45 aa)
MPSLPPPPTRRRRNQFQPNLHAHWYFDVTIGRSPWVLGKTTSVHT*

>peptide 8 (36 aa)
YGYLVTTSPQSKTPPWYAPIRPPKAFVALVVHRSHG*

>peptide 9 (31 aa)
MFPSCREQSELRKSFRIRSALQPCFPLSLPL*

Sequence

>CNT30662061
CCTACGGCTACCTTGTTACGACTTCACCCCAGTCGAAGACCCCACCGTGGTATGCGCCAATAAGACCACCAAAGGCCTTTGTGGCACTAGTGGTACACAG
AAGTCATGGGTGATCATTGGTCCGATGCTTCGGGCGAAACCAATTCCCAGGGTGTGACGGGCGGTGTGTACAGGGCCCGGGTACATATTCACCGCGGCAT
GCTGATCCGCGATTACTAGCGATTTCAACTTCATGTTCCCGAGTTGCAGAGAACAATCCGAACTGAGGAAATCTTTCCGGATTCGCTCCGCCTTACAGCC
TTGCTTCCCATTGTCATTGCCATTGTAGCACGTGTGTGGCCCAGCCCATAAGGGCCATGCGGACTTGACGTCATCCCCACCTTCCTCCAGTATCTCACTG
GCAGTCCCTCGTGAGTGCGGCACGCACCTTTTTCTTTGTTTCGGAGCGGGGCGCGTACTATTACCACTACGTTCCACACCATTTTCTGGCCTTCATGCCG
AGTCTTCCTCCGCCGCCAACTCGACGTCGTCGTAACCAATTTCAACCAAACCTCCATGCTCACTGGTACTTTGACGTCACTATAGGTAGGTCTCCGTGGG
TCTTGGGCAAGACGACTTCGGTTCACACGTGAAAGTGCTTCGAAAGGCACCGGCTCCCAATGGTGAAATTCTTGCTGAAAGCACAGCTACGTGCTGGCAC
TCAATCAAGTAGTAGCGCTGGCACGTCACTCGGTGGCAATTTCTCCTTAGGCGCATGTCTCAGCAACACAAAACGAGGGTTTCGCTCGTTATAGGACTTG
ACCAAACATCTCACGACACGAGCTGACGAGAGCCATGCAGCACCTGTATGAAAGTCAGTACCATCCTGTTAAGGACAGGTTTTGTTGTTCATATGTCAAG
GGCTGGTAAGGTTTTGCGCGTTGTATCGAATTAAACCACATGCTCCACCGCTTGTGCAGGCCCCCGTCAATTCCTTTGAGTTTCGGTCTTGCGACCGTAC
TCCCCAGGCGGAGTGTTTCACGCGTTAGCTGGGCCCCTGATCCGCGTAGACCAAGGGCGAACACTCATCGTTTACGGCATGGACTACCAGGGTATCTAAT
CCTGTTCGCTCCCCATGCTTTCGCACCCCAGCGTCGGTAGGGACCCAGAGAGCTGCCTTCGCTTTTGGCGTTCCTTCGTAGATCTACGGATTTCACCCCT
ACACACGAAATTCCACTCTCCTCTGTCTCACTCAAGTGAATTGGTTTCGAGAGCATTCCGCCACTTTTTGGCGACTTTCACTTTCAACCCGATTCACCGC
CTACGTGCCCTTTACGCCCAGTCATTCCGAAGAACACTTGCCCCCCCCGTCTTACCGCGGCTGCTGGCACGGAGTTAGCCGGGGCTTCTTCCTCGAGTCA
TGTCATGATCGCGCACTCGACGAAAGAGCTTTACAAGCGGCATTGCCCTTCTTCACTCACGCGATATTGCTGGATCGGGCTTTCGCCCATTGTCCAAGAT
TCCCCACTGCTGCCCCCCGTGGGAGTCCGGGCCGTGTCTCAGTCCCAGTGTGGCTGATCATCCGAAAAGACCAGCTAAGCATCATTGGCTTGGTCAGCCT
TTACCTGACCAACTACCTAATACTACGCAGGCTCATCAAACAGCGCTTTTGAGCTTTCTTCAGGATTTGGCCCGAACTGTTCGGCAGATTCCCACGCGTT
ACGCACCCGTTCGCCACTTTGTTCTCAACTATTCCGATTCCAGCAAACGGAGGCCGTTAGGTCATAGCCGTAGCGCGCGCCCTGTAGTTTTGAAGCAGGG
CGAGACAACTTTAGCTAGGAGCCTCTTTTCCTTCTGCCCAGCTCCCCGAAAACAACGTTCGACTTGCATGTGTTAAGCATATAGCTAGCGTTCCTTCTGA
GCCAGGATCAAACTCAGAT