Detailed information on CNT30661953


BLAST search results

BLAST vs Swiss-Prot: nothing found

BLAST vs NONCODE: nothing found

Results of reciprocal BLAST search (potential orthologs)
TargetQuery speciesTarget speciesQuery coverage (%)Target coverage (%)IdentityAlignment length (nt)Orientation
CNT30292481Triticum dicoccoidesTriticum aestivum52.2460.24100303forward
CNT30222985Triticum dicoccoidesHordeum vulgare75.3493.3890.16437forward
CNT30438202Triticum dicoccoidesAegilops tauschii55.8651.0292.28324forward
CNT30683064Triticum dicoccoidesTriticum urartu75.6993.693.17439forward

Expression of CNT30661953

Peptides detected in this lncRNA

>peptide 1 (30 aa)
MAVHLLCSCWQVLTYIQRPSIRWRYMVSRL*

>peptide 2 (45 aa)
MTDDRSSSCSRSSRSWCRTCTGRCRSRSFLRSKTSSRLLGIGWKL*

>peptide 3 (51 aa)
FLLRKIYTCKINTQVYKDTPIPSGAHVASREHSAGLVTTQAPRKLIVQTQV*

>peptide 4 (60 aa)
MIDLAAAAGAAAAGAALALGAAAAAVSSAARHPRGCLGLDGSFDWCWLGASSVLLACWLE*

>peptide 5 (29 aa)
MHGSAPALLMLAGAYIHTKTLDQVALHGK*

Sequence

>CNT30661953
TTTTTCTTCTAAGAAAAATATACACCTGTAAAATAAATACACAGGTGTATAAAGATACACCGATTCCAAGCGGTGCACACGTTGCTTCAAGAGAGCATTC
AGCTGGTCTAGTAACAACCCAGGCACCTCGCAAGTTGATAGTACAAACACAAGTATAGGTTAAACCACGGGAGATTTTATTTAGGGGTCGGTTTACATGC
ATGGCAGTGCACCTGCTCTGCTCATGCTGGCAGGTGCTTACATACATACAAAGACCCTCGATCAGGTGGCGTTACATGGTAAGTAGATTGTAGATAGATC
ATAGATATGATGCGCGCGGTGCATGCATGACCGATGATAGATCTAGCAGCTGCAGCAGGAGCAGCCGCAGCTGGTGCCGCACTTGCACTGGGCGCTGCCG
CAGCCGCAGTTTCCTCCGCAGCAAGACATCCTCGAGGTTGCTTGGGATTGGATGGAAGCTTTGATTGGTGTTGGCTAGGAGCTTCTTCTGTGCTTCTTGC
TTGCTGGCTTGAGTAACAATGGCAGGCAGCGAGGGCTATTTATAGGCGAGTGAGCATCAAGGAAGGAGGAGAAAGAGAAG